Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05978 and RBAM_036170

See Amino acid alignment / Visit BSNT_05978 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:29
# Commandline: needle
#    -asequence dna-align/BSNT_05978___katE.1.9828.seq
#    -bsequence dna-align/RBAM_036170___katE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05978___katE-RBAM_036170___katE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05978___katE-RBAM_036170___katE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05978___katE
# 2: RBAM_036170___katE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2119
# Identity:    1631/2119 (77.0%)
# Similarity:  1631/2119 (77.0%)
# Gaps:         125/2119 ( 5.9%)
# Score: 6346.0
# 
#
#=======================================

BSNT_05978___      1 ATGAGTGATGATCAAAACAAACGTGTAAATGAACACTCAAAGGACGAGCA     50
                     |||||||||||||||||||||||.|||||||||||||||||||||||.||
RBAM_036170__      1 ATGAGTGATGATCAAAACAAACGAGTAAATGAACACTCAAAGGACGAACA     50

BSNT_05978___     51 GCTTGAACAGTACAGGACCGATAACAGCGGGAAGAAAATGACGACAAACC    100
                     |||.||.||||||.||.|.|||||||||||.||.|||||||||||.||.|
RBAM_036170__     51 GCTGGAGCAGTACCGGTCTGATAACAGCGGCAAAAAAATGACGACCAATC    100

BSNT_05978___    101 A-AGGCTTGCGAGTGTCAGAGGATGAGCATTCGTTAAAAGCCGGGGTTCG    149
                     | .||||| ||.|||||.||||||||.|||||.||||||||.||.||.||
RBAM_036170__    101 AGGGGCTT-CGCGTGTCTGAGGATGAACATTCTTTAAAAGCGGGCGTCCG    149

BSNT_05978___    150 CGGTCCGACGCTGATGGAGGATTTTCACTTTCGGGAGAAAATGACGCACT    199
                     |||.||.||||||||||||||||||||.|||||.||.|||||||||||||
RBAM_036170__    150 CGGCCCCACGCTGATGGAGGATTTTCATTTTCGTGAAAAAATGACGCACT    199

BSNT_05978___    200 TTGACCATGAGAGGATTCCGGAGCGCGTTGTGCATGCGCGCGGGTATGGC    249
                     |||||||.|||.||||||||||.||.||.||.||||||||||||||.|||
RBAM_036170__    200 TTGACCACGAGCGGATTCCGGAACGGGTCGTTCATGCGCGCGGGTACGGC    249

BSNT_05978___    250 GTGCATGGCTTTTTTCAGGTTTACGAACCAATGACGGAATATACACGGGC    299
                     ||.|||||...|||||||||.||||||||.||||||||||||||||||||
RBAM_036170__    250 GTTCATGGGCATTTTCAGGTGTACGAACCGATGACGGAATATACACGGGC    299

BSNT_05978___    300 CAAATTTCTTCAGGACCCTTCGGTGAAGACACCGGTATTTGTCCGTTTTT    349
                     .||||||.|.||.|||||.||.||.||.||.||.||.||.||||||||.|
RBAM_036170__    300 GAAATTTTTGCAAGACCCGTCCGTCAAAACGCCTGTTTTCGTCCGTTTCT    349

BSNT_05978___    350 CTACGGTCGCGGGTTCTAAAGGCTCCGCAGACACGGTGCGGGATGCCAGA    399
                     |.||.||.||||||||.||.||.||.||.|||||.||.||.||.|||||.
RBAM_036170__    350 CAACAGTGGCGGGTTCCAAGGGGTCAGCCGACACCGTCCGTGACGCCAGG    399

BSNT_05978___    400 GGCTTTGCGACAAAATTTTATACTGAAGAAGGAAACTATGACCTTGTGGG    449
                     ||.||||||||.||.|||||||||||||||||.|||||||||||.||.||
RBAM_036170__    400 GGATTTGCGACGAAGTTTTATACTGAAGAAGGGAACTATGACCTCGTCGG    449

BSNT_05978___    450 AAATAACATTCCGGTGTTTTTCATTCAGGATGCGATCAAATTTCCGGATT    499
                     |||.||.|||||||||||.|||||||||||.|||||||||||.||||||.
RBAM_036170__    450 AAACAATATTCCGGTGTTCTTCATTCAGGACGCGATCAAATTCCCGGATC    499

BSNT_05978___    500 TGGTTCATGCGTTTAAGCCTGAGCCACACAATGAAATGCCTCAGGCCGCG    549
                     |.|||||.||..|.||.||.||.||.||||||||||||||.|||||.|||
RBAM_036170__    500 TCGTTCACGCCATAAAACCGGAACCGCACAATGAAATGCCGCAGGCTGCG    549

BSNT_05978___    550 ACTGCTCACGATACGTTTTGGGATTTTGTCGCCAATAACCCTGAGTCGGC    599
                     ||.|||||.||||||||.||||||||||||||.||.||.|||||.||.||
RBAM_036170__    550 ACGGCTCATGATACGTTCTGGGATTTTGTCGCAAACAATCCTGAATCCGC    599

BSNT_05978___    600 TCACATGGTGATGTGGACGATGTCAGACAGAGGCATCCCGCGCAGCTACA    649
                     .||||||||.||||||||||||||.|||.|.|||||||||||.|||||..
RBAM_036170__    600 GCACATGGTCATGTGGACGATGTCTGACCGCGGCATCCCGCGGAGCTATC    649

BSNT_05978___    650 GAATGATGGAAGGCTTCGGCGTTCACACGTTCCGTTTTGTCAATGAACAA    699
                     |.||||||||.|||||||||||.||.|||||||||||.|||||.||..||
RBAM_036170__    650 GGATGATGGAGGGCTTCGGCGTGCATACGTTCCGTTTCGTCAACGAGAAA    699

BSNT_05978___    700 GGAAAGGCACGTTTCGTGAAATTTCACTGGAAGCCGGTGCTCGGCGTGCA    749
                     |||||.||.||.||.||.|||||.||||||||.||.|||||||||||.||
RBAM_036170__    700 GGAAAAGCGCGCTTTGTAAAATTCCACTGGAAACCCGTGCTCGGCGTTCA    749

BSNT_05978___    750 TTCTCTCGTATGGGATGAAGCGCAAAAAATTGCCGGGAAAGATCCAGATT    799
                     |||.||||||||||||||||||||.||||||||||||||||||||.||||
RBAM_036170__    750 TTCCCTCGTATGGGATGAAGCGCAGAAAATTGCCGGGAAAGATCCCGATT    799

BSNT_05978___    800 TCCACCGCCGTGACCTGTGGGAAACAATTGAAAACGGCGGCAAGGTTGAA    849
                     ||.|||||||.||||||||||||||.|||||||||||||||||.||.||.
RBAM_036170__    800 TCAACCGCCGCGACCTGTGGGAAACGATTGAAAACGGCGGCAAAGTCGAG    849

BSNT_05978___    850 TACGAGCTCGGCGTGCAGATGATTGATGAGGAAGATGAATTCAAGTTTGA    899
                     ||.||||||||.||.|||||||||||.||.|||||||||||.||.|||||
RBAM_036170__    850 TATGAGCTCGGTGTTCAGATGATTGACGAAGAAGATGAATTTAAATTTGA    899

BSNT_05978___    900 TTTTGATATTCTTGACCCAACTAAGCTGTGGCCGGAAGAGCTTGTGCCGG    949
                     |||.|||||.|||||.||.||.||||||||||||||.|||.|.||.||.|
RBAM_036170__    900 TTTCGATATCCTTGATCCGACGAAGCTGTGGCCGGAGGAGTTGGTTCCCG    949

BSNT_05978___    950 TGAAGATCATTGGAAAAATGACGCTGAACCGCAATCAGGATAATGTGTTT    999
                     |.|||.|.||.|||||||||||.||..|||||||||||||.|||||.|||
RBAM_036170__    950 TCAAGCTGATCGGAAAAATGACCCTTGACCGCAATCAGGACAATGTCTTT    999

BSNT_05978___   1000 GCGGAAACAGAACAAGTCGCATTCCACCCGGGAAATGTCGTGCCGGGCAT   1049
                     ||||||||.|||||||||||||||||||||||.|||||||||||||||||
RBAM_036170__   1000 GCGGAAACGGAACAAGTCGCATTCCACCCGGGCAATGTCGTGCCGGGCAT   1049

BSNT_05978___   1050 CGATTTTACCAATGACCCGCTATTGCAGGGGCGGCTTTTCTCTTATACGG   1099
                     .|||||.||||||||.|||||..|.||.||.|||||||||||||||||||
RBAM_036170__   1050 TGATTTCACCAATGATCCGCTTCTTCAAGGCCGGCTTTTCTCTTATACGG   1099

BSNT_05978___   1100 ATACACAGCTCATCCGTCTTGGCGGCCCGAACTTCCATGAGATTCCGATT   1149
                     |||||||||||||||||||||||||.|||||.||.||.|||||||||||.
RBAM_036170__   1100 ATACACAGCTCATCCGTCTTGGCGGGCCGAATTTTCACGAGATTCCGATC   1149

BSNT_05978___   1150 AACCGGCCGGTCTGTCCATTCCATAACAACCAATACGACGGCTATCACCG   1199
                     ||||||||||||||.||.||||||||||||||||||||||||||.|||||
RBAM_036170__   1150 AACCGGCCGGTCTGCCCGTTCCATAACAACCAATACGACGGCTACCACCG   1199

BSNT_05978___   1200 GATGACGATCAATAAGGGACCTGTCGCTTATCATAAAAACTCACTGCAAA   1249
                     |||||||||.||||||||.||.|||||.|||||||||||.||.|||||.|
RBAM_036170__   1200 GATGACGATTAATAAGGGTCCCGTCGCCTATCATAAAAATTCCCTGCAGA   1249

BSNT_05978___   1250 ACAATGATCCGTCGCCTGCGACAGCTGAAGAAGGCGGCTACGTCCACTAT   1299
                     ||||||||||||||||.||..|||..|||||||||||.|||||.||.||.
RBAM_036170__   1250 ACAATGATCCGTCGCCGGCCTCAGAAGAAGAAGGCGGATACGTTCATTAC   1299

BSNT_05978___   1300 CAGGAAAAAGTCGAGGGCAAAAAAATCCGCCAGCGAAGCGACAGCTTCAA   1349
                     |||||||||||.||.||||.|||||||||||||||.||.||.||||||||
RBAM_036170__   1300 CAGGAAAAAGTAGAAGGCAGAAAAATCCGCCAGCGCAGTGAGAGCTTCAA   1349

BSNT_05978___   1350 CGATTATTACTCACAGGCGAAGCTTTTCTGGAACAGCATGTCTCCTGTGG   1399
                     .||.||||..||.|||||.|||.|.||||||||||||||||||||.|..|
RBAM_036170__   1350 TGACTATTTTTCTCAGGCCAAGATGTTCTGGAACAGCATGTCTCCCGCCG   1399

BSNT_05978___   1400 AGAAACAGCACATCATTTCTGCTTTCTGCTTCGAGGTCGGGAAGGTCAAA   1449
                     |||||.|.||.|||||.||.||.|||||.||.||.|||||.||.||.||.
RBAM_036170__   1400 AGAAAGAACATATCATCTCCGCATTCTGTTTTGAAGTCGGAAAAGTGAAC   1449

BSNT_05978___   1450 AGCAAAGACGTACAGCGGCAGGTCGTTGATGTCTTCAGCAATGTCGATGC   1499
                     |||||.||.||.||||.||||||.||||||||||||||..|.|||||.||
RBAM_036170__   1450 AGCAAGGATGTGCAGCAGCAGGTGGTTGATGTCTTCAGTCACGTCGACGC   1499

BSNT_05978___   1500 AGATTTAGCAGAAGAAATTGCCAAAGGAGTAGGCGTGGCGACGCCCGCGA   1549
                     .|...|.||.||.....||||.||||||.|.||||||....||||..|||
RBAM_036170__   1500 CGGGCTTGCCGAGCGTGTTGCGAAAGGAATCGGCGTGAACCCGCCGCCGA   1549

BSNT_05978___   1550 AG---CGTAAAGCATCTAAAGAAA--TTCTTACTTCGCCTGCGTTAAGCC   1594
                     ||   |||   |.||||.|.||||  |||  |||||.||.||.|||||||
RBAM_036170__   1550 AGGACCGT---GAATCTGATGAAACGTTC--ACTTCCCCGGCCTTAAGCC   1594

BSNT_05978___   1595 ----AAGCCCGTACAGTGAAAACCGCGTCAACAAGAAAAGTCGCTGT---   1637
                         ||.|    ||.|||||.||.||..|.|||||..|.|||||.||   
RBAM_036170__   1595 AGGAAAAC----ACGGTGAAGACGGCAGCGACAAGGCAGGTCGCGGTTTT   1640

BSNT_05978___   1638 -ACTGGCCGGAAACGGATT---TCATGAAAAAGAGCTGCAAAC-AGTGCT   1682
                      ||.|.||    ||||.||   |.||||.||||    .||||| ||||||
RBAM_036170__   1641 AACCGACC----ACGGGTTTTCTGATGAGAAAG----TCAAACAAGTGCT   1682

BSNT_05978___   1683 GGAAGCCTTAAAGCAAGAAGGAATCACAGTGGATATCATCAGCCAAAATC   1732
                     .||.||.|..||.||.|..|||.|||.||..|||||||||||||.....|
RBAM_036170__   1683 TGACGCATGCAAACAGGCGGGAGTCAGAGCCGATATCATCAGCCCCGCGC   1732

BSNT_05978___   1733 TGGGGTATATGACAAGCGGCAGCGGACA---------GCAGCTTGAGGC-   1772
                     ||||         ||.||.||..|||.|         |.||||.||.|| 
RBAM_036170__   1733 TGGG---------AACCGTCAAGGGAGAAAACGGTACGGAGCTGGAAGCG   1773

BSNT_05978___   1773 -CAGCGGCACGTTCCTGACGGTTGATTCTGTTCTGTATGATGCCGTCT--   1819
                      ||||  |||.||||||||.|..|||||.||.|||||.||.||.||.|  
RBAM_036170__   1774 TCAGC--CACTTTCCTGACAGCGGATTCCGTCCTGTACGACGCTGTTTTC   1821

BSNT_05978___   1820 ATGCCGCAGGAGGGCCGGAGTTAAA--------AGACA---ACAAA---C   1855
                     ||.|||          ||.|.||||        |||||   .||||   |
RBAM_036170__   1822 ATTCCG----------GGCGGTAAACAAAGCACAGACAGCCTCAAAGCCC   1861

BSNT_05978___   1856 AA------GCGATGGCGTTTATCAGAGAAGCTTACAATCACTACAAGGCG   1899
                     ||      ||.|..|..||..||||.|||||.|.||..||.|||||.|||
RBAM_036170__   1862 AAAAATCGGCCAGAGACTTCGTCAGCGAAGCCTTCAGCCATTACAAAGCG   1911

BSNT_05978___   1900 ATCGGTGCAGCAAATGAAGGAATTGACCTTCT-TCAATCCT--CTGTCGG   1946
                     |||||.||..|...||||||||..||.||||| .|   |||  |.|.|||
RBAM_036170__   1912 ATCGGCGCCTCCGGTGAAGGAAAAGAACTTCTCGC---CCTCGCCGCCGG   1958

BSNT_05978___   1947 ----GACAACAGAGGGACCAGGCATCGTAACGGCTAAAGATGAACCTGAC   1992
                         ||.|||    ||.||.|||.|.||..|||   |.|  |||.|||..
RBAM_036170__   1959 AACCGAAAAC----GGCCCCGGCCTTGTTCCGG---ACG--GAAACTGCG   1999

BSNT_05978___   1993 TACACCGCTTTCAGCAAGGCATTTATCGATGCGGTTGCTGCTCATCGCCA   2042
                     .|||                ||||.|..|.||.||.||||..|||||.||
RBAM_036170__   2000 AACA----------------ATTTCTGAAAGCCGTGGCTGAGCATCGGCA   2033

BSNT_05978___   2043 TTGGGATAGACGAATTTGA   2061
                     ||||||.|||...||.|.|
RBAM_036170__   2034 TTGGGACAGAAACATATAA   2052


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.