Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05979 and RBAM_036180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:29
# Commandline: needle
# -asequence dna-align/BSNT_05979___citH.1.9828.seq
# -bsequence dna-align/RBAM_036180___citH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05979___citH-RBAM_036180___citH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05979___citH-RBAM_036180___citH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05979___citH
# 2: RBAM_036180___citH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1281
# Identity: 1190/1281 (92.9%)
# Similarity: 1190/1281 (92.9%)
# Gaps: 0/1281 ( 0.0%)
# Score: 5586.0
#
#
#=======================================
BSNT_05979___ 1 ATGCTTGCCATACTCGGTTTTGTGATGATGATTGTCTTTATGTACCTTAT 50
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036180__ 1 GTGCTTGCCATACTCGGTTTTGTGATGATGATTGTCTTTATGTACCTTAT 50
BSNT_05979___ 51 TATGTCTAACCGGCTTTCCGCTCTTATTGCTTTGATTGTCGTTCCTATTG 100
|||||||||.||||||||||||||||||||||||||||||||||||.|||
RBAM_036180__ 51 TATGTCTAATCGGCTTTCCGCTCTTATTGCTTTGATTGTCGTTCCTGTTG 100
BSNT_05979___ 101 TGTTCGCCCTGATCAGCGGATTTGGCAAAGATCTCGGCGAGATGATGATT 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_036180__ 101 TGTTTGCCCTGATCAGCGGATTTGGCAAAGATCTCGGCGAGATGATGATT 150
BSNT_05979___ 151 CAGGGCGTTACAGACCTCGCCCCTACCGGTATCATGCTGTTATTCGCCAT 200
||.|||||||||||||||||.||||||||.||.|||||||||||||||||
RBAM_036180__ 151 CAAGGCGTTACAGACCTCGCTCCTACCGGGATTATGCTGTTATTCGCCAT 200
BSNT_05979___ 201 CCTGTATTTCGGCATTATGATTGACTCAGGCCTGTTTGATCCTCTCATTG 250
||||||||||||||||||||||||||||||.|||||||||||.|||||||
RBAM_036180__ 201 CCTGTATTTCGGCATTATGATTGACTCAGGTCTGTTTGATCCCCTCATTG 250
BSNT_05979___ 251 CCAAAATCTTATCGTTTGTCAAAGGAGATCCGTTAAAAATCGCCGTAGGC 300
|||||||..|||||.||||||||||.||||||||||||||||||.|.|||
RBAM_036180__ 251 CCAAAATTCTATCGCTTGTCAAAGGGGATCCGTTAAAAATCGCCATCGGC 300
BSNT_05979___ 301 ACAGCGGTTCTGACCATGACCATTTCGCTGGACGGAGATGGGACAACAAC 350
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_036180__ 301 ACAGCGGTTCTGACGATGACCATTTCGCTGGACGGAGATGGGACAACAAC 350
BSNT_05979___ 351 CTATATGATTACCATTGCAGCAATGCTGCCTCTCTACAAACGGCTCGGCA 400
.|||||||||||.|||||.|||||||||||.||.||||||||||||||||
RBAM_036180__ 351 GTATATGATTACGATTGCGGCAATGCTGCCCCTTTACAAACGGCTCGGCA 400
BSNT_05979___ 401 TGAACCGTTTGGTGTTAGCGGGAATAGCGATGCTCGGTTCGGGGGTTATG 450
||||||||||||||.|.|||||.||.|||||||||||||||||.||.|||
RBAM_036180__ 401 TGAACCGTTTGGTGCTGGCGGGGATCGCGATGCTCGGTTCGGGCGTCATG 450
BSNT_05979___ 451 AATATTATCCCGTGGGGCGGGCCGACTGCGAGGGTTTTGGCCTCCTTAAA 500
|||||.||.|||||||||||||||||.||||||||||||||.|||||.||
RBAM_036180__ 451 AATATGATTCCGTGGGGCGGGCCGACGGCGAGGGTTTTGGCTTCCTTGAA 500
BSNT_05979___ 501 ATTGGACACGTCAGAGGTTTTCACGCCGCTGATTCCCGCTATGATCGCCG 550
||||||||||||.||.||.||.|||||||||||||||||.|||||.||||
RBAM_036180__ 501 ATTGGACACGTCGGAAGTCTTTACGCCGCTGATTCCCGCAATGATTGCCG 550
BSNT_05979___ 551 GCATTCTCTGGGTGATCGCCGTTGCTTATATCCTCGGAAAGAAAGAGCGG 600
||.||||||||||||||||||||||||||.||||||||||.|||||.|||
RBAM_036180__ 551 GCGTTCTCTGGGTGATCGCCGTTGCTTATCTCCTCGGAAAAAAAGAACGG 600
BSNT_05979___ 601 AAGCGGCTCGGCGTCATTTCGATTGATCACGCACCGTCTTCCGATCCGGA 650
||||||||||||.|||||||||||||.||||||||||||||.||||||||
RBAM_036180__ 601 AAGCGGCTCGGCATCATTTCGATTGAACACGCACCGTCTTCTGATCCGGA 650
BSNT_05979___ 651 GGCCGCACCGCTCAAGCGTCCCGCTCTTCAATGGTTTAACCTGCTGCTGA 700
|||.||.|||||.||||||||||||||.||||||||||||||||||||.|
RBAM_036180__ 651 GGCGGCGCCGCTGAAGCGTCCCGCTCTCCAATGGTTTAACCTGCTGCTCA 700
BSNT_05979___ 701 CTGTCGCTCTGATGGCCGCACTGATCACCAGCCTGCTGCCGCTTCCTGTT 750
|||||||.|||||||||||.|||||||||||||||||.||..|.||||||
RBAM_036180__ 701 CTGTCGCCCTGATGGCCGCTCTGATCACCAGCCTGCTTCCCATCCCTGTT 750
BSNT_05979___ 751 CTTTTTATGACTGCGTTCGCCGTTGCCTTGATGGTTAACTATCCAAATGT 800
||||||||||..|||||||||.|.|||||||||.|.||||||||||||||
RBAM_036180__ 751 CTTTTTATGATCGCGTTCGCCATCGCCTTGATGATCAACTATCCAAATGT 800
BSNT_05979___ 801 CAAAGAGCAGCAGAAACGAATCTCGGCGCATGCGGGTAATGCGTTAAACG 850
||||||||||||||||||.||.||.|||||||||||||||||||||||||
RBAM_036180__ 801 CAAAGAGCAGCAGAAACGGATTTCAGCGCATGCGGGTAATGCGTTAAACG 850
BSNT_05979___ 851 TTGTCTCGATGGTGTTTGCTGCGGGCATATTCACAGGCATTCTCTCCGGC 900
|||||||.|||||||||||.||.|||||||||||||||||||||||||||
RBAM_036180__ 851 TTGTCTCAATGGTGTTTGCGGCAGGCATATTCACAGGCATTCTCTCCGGC 900
BSNT_05979___ 901 ACAAAAATGGTGGATGCCATGGCGCATTCTCTCGTTTCACTCATCCCTGA 950
|||||||||||||||||.||||||||||||||||||||.|||||||||||
RBAM_036180__ 901 ACAAAAATGGTGGATGCGATGGCGCATTCTCTCGTTTCCCTCATCCCTGA 950
BSNT_05979___ 951 TGCCATGGGCCCGCACCTGCCGTTGATCACTGCGATCGTCAGCATGCCCT 1000
|||||||||||||||.||||||||||||||||||||.|.|||||||||.|
RBAM_036180__ 951 TGCCATGGGCCCGCATCTGCCGTTGATCACTGCGATTGCCAGCATGCCTT 1000
BSNT_05979___ 1001 TCACCTTTTTCATGTCGAATGACGCCTTTTACTTCGGTGTCCTTCCCATC 1050
||||||||||||||||.|||||||||||||||||||||||.|||||||||
RBAM_036180__ 1001 TCACCTTTTTCATGTCAAATGACGCCTTTTACTTCGGTGTGCTTCCCATC 1050
BSNT_05979___ 1051 ATCGCCGAAGCCGCTTCCGCTTACGGAATAGACGCCGCTGAAATCGGAAG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036180__ 1051 ATCGCCGAAGCCGCTTCCGCTTACGGAATAGACGCCGCTGAAATCGGAAG 1100
BSNT_05979___ 1101 GGCCTCCTTGCTGGGGCAGCCTGTGCATCTGCTCAGCCCGCTTGTGCCTT 1150
.||||||||||||||.|||||.||||||||||||||||||||||||||.|
RBAM_036180__ 1101 AGCCTCCTTGCTGGGCCAGCCGGTGCATCTGCTCAGCCCGCTTGTGCCAT 1150
BSNT_05979___ 1151 CCACCTATCTATTGGTAGGAATGGCAGGCGTCAGCTTTGGCGACCATCAA 1200
||||||||||||||||.||||||||.|||||||||||||||||.||||||
RBAM_036180__ 1151 CCACCTATCTATTGGTCGGAATGGCGGGCGTCAGCTTTGGCGATCATCAA 1200
BSNT_05979___ 1201 AAATTCACTATTAAATGGGCCGTAGGAACAACGATTGTGATGACGATTGC 1250
||||||||.||||||||||||||.||.|||||||||||||||||||||||
RBAM_036180__ 1201 AAATTCACCATTAAATGGGCCGTGGGGACAACGATTGTGATGACGATTGC 1250
BSNT_05979___ 1251 CGCACTTTTGATTGGGATTATTTCTTTCTAA 1281
.||.||||||||||||||||||||.||.|||
RBAM_036180__ 1251 GGCGCTTTTGATTGGGATTATTTCGTTTTAA 1281
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