Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05988 and RBAM_036220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:29
# Commandline: needle
# -asequence dna-align/BSNT_05988___deaD.1.9828.seq
# -bsequence dna-align/RBAM_036220___dbpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05988___deaD-RBAM_036220___dbpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05988___deaD-RBAM_036220___dbpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05988___deaD
# 2: RBAM_036220___dbpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1463
# Identity: 1103/1463 (75.4%)
# Similarity: 1103/1463 (75.4%)
# Gaps: 46/1463 ( 3.1%)
# Score: 4027.0
#
#
#=======================================
BSNT_05988___ 1 ATGAGTCATTTTAAAAACTATCAAATCAGTCATGACATTTTACGAGCATT 50
||||.|.|.|||||..|.|||...|||||.|..||.||...|||.||..|
RBAM_036220__ 1 ATGAATGAGTTTAATGAATATGCGATCAGCCCCGAAATCCGACGGGCGCT 50
BSNT_05988___ 51 GGAAGGACTGGGATATACAGAACCGACCAAGGTGCAGCAGAGTGTGATCC 100
|.|.||..||..|||.||.||.|||||..|.|||||||.|.|.||.||||
RBAM_036220__ 51 GAATGGCTTGCAATACACCGAGCCGACTGAAGTGCAGCGGCGCGTCATCC 100
BSNT_05988___ 101 CCGCTGCCCTAGAACGAAAGGATCTTGTCGTCAAATCACAGACAGGAAGC 150
||||.||.||..||..|||.||.||.|||||||||||.|||||.||.|||
RBAM_036220__ 101 CCGCCGCGCTGCAAAAAAAAGACCTCGTCGTCAAATCGCAGACGGGCAGC 150
BSNT_05988___ 151 GGGAAAACGGCTTCGTTCGGGATTCCTCTCTGTGAGCTGGCGGATTGGGA 200
||.|||||.||..|.|||||.|||||..||||.|||||.|||||.|||||
RBAM_036220__ 151 GGCAAAACCGCGGCTTTCGGCATTCCGATCTGCGAGCTTGCGGAATGGGA 200
BSNT_05988___ 201 TGAAAACAAGCCGCAGGCGCTTATTTTAACTCCAACCCGTGAGCTTGCGG 250
.||||||||.|||||||||||.||||||||.||.|||||.||||||||||
RBAM_036220__ 201 GGAAAACAAACCGCAGGCGCTGATTTTAACGCCGACCCGCGAGCTTGCGG 250
BSNT_05988___ 251 TGCA-AGTAAAGGAAGATATCACGAACATCGGACGATTTAAACGGATCAA 299
.||| |.|||| ||||||||||||||.|||||.||.||.||||||||.||
RBAM_036220__ 251 CGCAGATTAAA-GAAGATATCACGAATATCGGCCGTTTCAAACGGATAAA 299
BSNT_05988___ 300 AGCGACAGCCGTATTTGGAAAATCCTCCTTTGATAAACAAAAAGCTGAGC 349
|||.||.||.||.||.||||||.|.||.|||||||||||.|||.|.||.|
RBAM_036220__ 300 AGCCACGGCGGTTTTCGGAAAAGCTTCTTTTGATAAACAGAAAACCGAAC 349
BSNT_05988___ 350 TTAAGCAAAAAAGTCACATTGTTGTCGGTACGCCGGGACGTGTTCTGGAT 399
|.|||||||||||.|||.|.||||.|||.||||||||.|||||.||.|||
RBAM_036220__ 350 TGAAGCAAAAAAGCCACGTCGTTGCCGGAACGCCGGGGCGTGTGCTTGAT 399
BSNT_05988___ 400 CATATCGAAAAAGGCACGCTGCCGTTGGATCGTCTCTCTTATTTGGTCAT 449
|||||.||||||||.|||||||||.|.||.||.||..|.|||.|.||.||
RBAM_036220__ 400 CATATAGAAAAAGGGACGCTGCCGCTTGAACGGCTGGCGTATGTAGTGAT 449
BSNT_05988___ 450 TGATGAAGCGGATGAGATGCTGAATATGGGCTTTATCGAGCAGGTGGAGG 499
|||.|||||||||||.||||||||||||||.|||||.||.||||||||.|
RBAM_036220__ 450 TGACGAAGCGGATGAAATGCTGAATATGGGATTTATTGAACAGGTGGAAG 499
BSNT_05988___ 500 CGATTATCAAGCATCTTCCG----ACTGAG-CGCACGACGATGCTGTTTT 544
|.||.||..|||||||.||| ||.||| | ||.||||||||||
RBAM_036220__ 500 CCATCATTCAGCATCTGCCGAAAAACAGAGTC-----ACCATGCTGTTTT 544
BSNT_05988___ 545 CGGCGACGCTGCCAGAGGACATTGAGAAATTAAGCCGTCA-ATATATGCA 593
|.|||||||||||.||.|||.|.|||||..|.||||| || |||||||.|
RBAM_036220__ 545 CAGCGACGCTGCCGGATGACGTCGAGAAGCTGAGCCG-CACATATATGAA 593
BSNT_05988___ 594 AAACCCGGAGCAT--ATCGAAATCAAAGCGGCCGGGCTTACCACAAGAAA 641
|.||||.|| || ||.|||.|.|||||.|..||.||.||.||||.|.|
RBAM_036220__ 594 AGACCCTGA--ATTGATTGAAGTAAAAGCAGAAGGCCTGACGACAAAAGA 641
BSNT_05988___ 642 TATTGAACATGCGGTGATTCAAGTA-AG-AGAAGAGAATAAATTTTCATT 689
||||||.|||...||.| |.||.| || |||||||.|.|||...||.||
RBAM_036220__ 642 TATTGAGCATTTTGTCA--CCAGAACAGAAGAAGAGGACAAAACATCTTT 689
BSNT_05988___ 690 GCTGAAAGATGTGCTGATGACGGAGAATCCCGACAGCTGCATCATTTTCT 739
||||...|||||.|||||.||.||.||.||.|||||||||||.||.||||
RBAM_036220__ 690 GCTGCGTGATGTCCTGATCACCGAAAACCCGGACAGCTGCATTATATTCT 739
BSNT_05988___ 740 GCCGAACGAAAGAGCACGTCAATCAGCTGACCGATGAATTGGA-----TG 784
||||.||.||||||...||||..|||.|.||||||||..|||| ||
RBAM_036220__ 740 GCCGGACAAAAGAGAGAGTCATCCAGTTAACCGATGAGCTGGACAGGCTG 789
BSNT_05988___ 785 ACTTAGGATATCCATGCGATAAAATTCACGGCGGAATGATTCAGGAAGAC 834
||.||.||.||||||||||||||||||||.|||.|.|||||||||
RBAM_036220__ 790 -----GGCTACCCTTGCGATAAAATTCACGGCGGCATGGTGCAGGAAGAC 834
BSNT_05988___ 835 CGATTCGACGTCATGAATGAATTTAAACGTGGCGAGTACCGTTA-CTTAG 883
||.||.|||||||||||||||||.|||||.|||||||.|||.|| ||.|
RBAM_036220__ 835 CGCTTTGACGTCATGAATGAATTCAAACGCGGCGAGTTCCGCTATCTCA- 883
BSNT_05988___ 884 TGGCGACGGATGTCGCCGCGCGCGGGATTGATATTGAAAATATCTCCCTT 933
|.|||||.||.||.|||||..|.||.||||||||||||||.|||..|||.
RBAM_036220__ 884 TTGCGACCGACGTTGCCGCCAGAGGAATTGATATTGAAAACATCAGCCTC 933
BSNT_05988___ 934 GTTATCAACTATGATCTTCCGGTTGAAAAGGAAAGCTATGTCCACCGCAC 983
||.|||||.||||||.|||||.|||||||.|||||||||||.||||||||
RBAM_036220__ 934 GTCATCAATTATGATATTCCGCTTGAAAAAGAAAGCTATGTGCACCGCAC 983
BSNT_05988___ 984 GGGCCGAACGGGACGCGCGGGGAACAAAGGAAAGGCCATTTCGTTTGTCA 1033
.|||||||||||.|||||.||..||...||...||||||..|||||||.|
RBAM_036220__ 984 CGGCCGAACGGGGCGCGCCGGACACCGCGGCCGGGCCATCACGTTTGTGA 1033
BSNT_05988___ 1034 CGGCCTTCGAAAAACGGTTTTTAGCCGACATTGAAGA-ATATATCGGATT 1082
||.|.||.|||...||||||.|....||||||| ||| |||||||||.||
RBAM_036220__ 1034 CGCCGTTTGAAGCGCGGTTTCTGAATGACATTG-AGACATATATCGGTTT 1082
BSNT_05988___ 1083 TGAAATCCAAAAAATAGAAGCCCCTTCTCAAGAGGAAGTGGCAAGGAA-- 1130
....||||||||....|||||.||.||..||.|.|||...|| ||||
RBAM_036220__ 1083 CCGCATCCAAAAGCGGGAAGCACCGTCAGAAAAAGAAACAGC--GGAACG 1130
BSNT_05988___ 1131 GAAACCAGAATTTCTAGCTAAACTGAATGACCGTCCGGAAAGCAAAAAGG 1180
||||.|.|..|||...|..|||.||||.|.|||.||.||...|||||..|
RBAM_036220__ 1131 GAAAGCGGCTTTTGCGGAAAAATTGAACGCCCGCCCCGATGTCAAAACAG 1180
BSNT_05988___ 1181 ACAAAAGCGAAGAGTTGAATAAAGACATTATGAAGCTGTATTTTAACGGC 1230
|||||||||||.||||.||.||||||||.|||||||||||.|||||||||
RBAM_036220__ 1181 ACAAAAGCGAACAGTTAAACAAAGACATCATGAAGCTGTACTTTAACGGC 1230
BSNT_05988___ 1231 GGAAAGAAAAAGAAAA---TCAGAGCCGTTGATTTTGTAGGAACGATTGC 1277
|| ||||||||||| |||||||.||.||||||||.|||||||||||
RBAM_036220__ 1231 GG---GAAAAAGAAAAAACTCAGAGCGGTCGATTTTGTCGGAACGATTGC 1277
BSNT_05988___ 1278 CAAAATTGACGGTGTGTCAGCTGACGACATCGGCATCATCACGATCATGG 1327
.|||||.|||||.||.|||||.||.||.|||||.||.||||||||..|||
RBAM_036220__ 1278 GAAAATCGACGGCGTTTCAGCCGATGATATCGGGATTATCACGATTTTGG 1327
BSNT_05988___ 1328 ATAACGCCTCATACGTTGAGATTTTAAATGGTAAAGGCCCTCATGTTCTC 1377
|.|||||.||.|||||.||||||.|.||.||.||||||||.||.|||||.
RBAM_036220__ 1328 ACAACGCATCGTACGTCGAGATTCTGAACGGCAAAGGCCCGCACGTTCTT 1377
BSNT_05988___ 1378 AAAGTGATGAAGAACACAACCGTCAAAGGGAAACAGCTGAAGGTGAATAA 1427
.|..|.|||||.||.||.||.||||||||.|||.|.|||||.||..||||
RBAM_036220__ 1378 GACATCATGAAAAATACGACGGTCAAAGGCAAAAAACTGAAAGTCCATAA 1427
BSNT_05988___ 1428 AGCGAATAAATGA 1440
|||.||.||||.|
RBAM_036220__ 1428 AGCCAAGAAATAA 1440
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