Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06025 and RBAM_036350
See
Amino acid alignment /
Visit
BSNT_06025 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence dna-align/BSNT_06025.1.9828.seq
# -bsequence dna-align/RBAM_036350___bglH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06025-RBAM_036350___bglH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06025-RBAM_036350___bglH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06025
# 2: RBAM_036350___bglH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1409
# Identity: 695/1409 (49.3%)
# Similarity: 695/1409 (49.3%)
# Gaps: 520/1409 (36.9%)
# Score: 2612.0
#
#
#=======================================
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 1 ATGAAGAGATTTCCGGATGGTTTTTTATGGGGCGGCGCAACGGCTGCCAA 50
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 51 TCAGATTGAAGGAGCTTATAAAGAAGGAGGCAAAGGACTTTCTACGGCGG 100
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 101 ATGTCTCCCCGGATGGCATTATGTCTCCGTTTCATGAGACAGACGATGCG 150
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 151 CTGAATTTGTATCACGACGCGATTGATTTTTATCACCGCTATCAAGAGGA 200
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 201 TATCGCCCTGTTTGCGGAGATGGGCTTTAAAGCGTTCCGCACCTCCATTG 250
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 251 CGTGGACGAGAATCTTTCCGAACGGCGATGAAACAGAGCCGAATGAAGAA 300
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 301 GGGCTGCAATTTTACGACCGTTTGTTTGACGAATTGAGAAAACATCAGAT 350
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 351 CGAACCGGTTGTCACGATTTCTCACTATGAGATGCCGCTCGGTCTTGTGA 400
BSNT_06025 0 -------------------------------------------------- 0
RBAM_036350__ 401 AAAACTACGGCGGCTGGAGAAACCGCCGGACGGTCGATTTCTATGAGCGG 450
BSNT_06025 1 ------------------------------------------------AT 2
||
RBAM_036350__ 451 TACGCCCGCACGGTTTTCACCCGTTATAAAGACAAGGTGAAATATTGGAT 500
BSNT_06025 3 GACGTTTAATGAAATTAACGTGGTGCTCCATGCGCCATTTACCGGAGGCG 52
|||.||.|||||.||.|||||.||.||.||.||.||.|||||.||.||||
RBAM_036350__ 501 GACCTTCAATGAGATCAACGTCGTTCTTCACGCTCCGTTTACAGGCGGCG 550
BSNT_06025 53 GTCTTGTTTTTGAAGAAGGAGAAAACAAATTAAACGCGATGTACCAGGCG 102
|.|||.|.||....|||||.|||||.|||..||||.||||||||||.|||
RBAM_036350__ 551 GCCTTATATTCCGGGAAGGCGAAAATAAACAAAACACGATGTACCAAGCG 600
BSNT_06025 103 GCACACCACCAATTTGTGGCCAGTGCCCTTGCTGTCAAAGCGGGCCACGA 152
||.|||||.|||||||||||.||.||.||.||.||.|||||.|||||.||
RBAM_036350__ 601 GCCCACCATCAATTTGTGGCGAGCGCGCTGGCGGTAAAAGCAGGCCATGA 650
BSNT_06025 153 CATCATTCCTGATTCGAAAATCGGCTGTATGATAGCGGCAACGACAACCT 202
.|||||.||.|||||..|.||||||||.|||||.||.||.|||||.||.|
RBAM_036350__ 651 GATCATCCCGGATTCACAGATCGGCTGCATGATCGCCGCGACGACGACGT 700
BSNT_06025 203 ATCCGATGACTTCTAAGCCTGAAGATGTCTTCGCTGCAATGGAGAATGAG 252
||||||||||..|.|||||.||.|||||.|..||.||..||.|.||.|||
RBAM_036350__ 701 ATCCGATGACGCCGAAGCCGGAGGATGTATATGCGGCTTTGCAAAAAGAG 750
BSNT_06025 253 CGCAAAACACTATTCTTCTCAGACGTTCAGGCAAGAGGC-GCGTATCCGG 301
||.|..||.||.|||||.||.||.||.|||||.||.||| || |||||||
RBAM_036350__ 751 CGGAGCACGCTGTTCTTTTCTGATGTACAGGCGAGGGGCAGC-TATCCGG 799
BSNT_06025 302 GATATATGAAACGCTATC-TGGCAGAAAACAATATTGAAATTGAAATGGC 350
|.||||||||||||| || |...|||||||...|||...||.||.|||..
RBAM_036350__ 800 GCTATATGAAACGCT-TCTTTAAAGAAAACGGAATTACGATCGAGATGAA 848
BSNT_06025 351 TGAAGGCGATGAAGAACTCTTGAAAGAACATACGGTAGATTACATTGGAT 400
.|||||.||.||.|..|||.||||||||||||||||.||||||||.||.|
RBAM_036350__ 849 GGAAGGAGACGAGGCGCTCCTGAAAGAACATACGGTGGATTACATCGGCT 898
BSNT_06025 401 TCAGCTACTACATGTCGATGGCGGCGAGCACTGATCCGCAAGAGCTTGCA 450
||||||||||||||||||||.||||.|||||.|..||..|.||.||.||.
RBAM_036350__ 899 TCAGCTACTACATGTCGATGACGGCCAGCACGGCGCCTGAGGATCTGGCG 948
BSNT_06025 451 AAATC--AGGCGGCAACCTGCTGGGCGGAGTCAAAAACCCTTACCTCAAA 498
.|||| || ||.||.||.||.|||||.||.||||||||.|||||.|||
RBAM_036350__ 949 CAATCTAAG--GGAAATCTTCTCGGCGGCGTGAAAAACCCGTACCTGAAA 996
BSNT_06025 499 TCATCAGAATGGGGCTGGCAAATTGATCCGAAAGGCTTGCGCATCACGCT 548
||.||.||||||||||||||.|||||||||||.||||||||||||||..|
RBAM_036350__ 997 TCTTCCGAATGGGGCTGGCAGATTGATCCGAAGGGCTTGCGCATCACCTT 1046
BSNT_06025 549 CAACACCTTATACGACCGTTATCAGAAGCCGCTGTTCATCGTTGAAAACG 598
.|||||..|.|||||||||||||||||.|||||.||||||||.|||||||
RBAM_036350__ 1047 AAACACGCTGTACGACCGTTATCAGAAACCGCTCTTCATCGTCGAAAACG 1096
BSNT_06025 599 GCCTTGGCGCTGTAGACAAGGTTGAAGAGGACGGCACGATTCAGGACGAT 648
|.||.|||||.||.||..||...||.||||||||.|..||||||||.||.
RBAM_036350__ 1097 GACTCGGCGCGGTTGATCAGCCGGAGGAGGACGGAAGCATTCAGGATGAC 1146
BSNT_06025 649 TACAGAATCAACTATCTGCGTGATCATTTAATTGAAGTGCGCGAAGCCAT 698
|||.|.|||||.||||||||||||||||||||.||.|...|.||.||.||
RBAM_036350__ 1147 TACCGCATCAATTATCTGCGTGATCATTTAATAGAGGCAAGAGAGGCGAT 1196
BSNT_06025 699 TGCGGACGGCGTTGAATTAATCGGATACACATCATGGGGGCCAATTGACC 748
||..||||||||.||..|.|||||.|||||.||.||||||||.|||||||
RBAM_036350__ 1197 TGAAGACGGCGTCGACCTGATCGGCTACACGTCGTGGGGGCCGATTGACC 1246
BSNT_06025 749 TTGTCAGCGCATCTACTGCGGAAATGAAAAAACGCTACGGTTTCATTTAT 798
|.||||||||.||.||.||.||||||||||||||||||||.|..||.|||
RBAM_036350__ 1247 TCGTCAGCGCCTCCACGGCAGAAATGAAAAAACGCTACGGCTATATCTAT 1296
BSNT_06025 799 GTGGACAGGGACAATGAAGGAAATGGAACATTTAACCGCATCAAGAAA-- 846
||.|||.|.|.||||||.|||||.||.||.|||.| ||||||
RBAM_036350__ 1297 GTCGACCGCGGCAATGACGGAAAAGGCACGTTTGA-------AAGAAAGA 1339
BSNT_06025 847 -----AAAAGCTTCAACTGGTATCAGCAGGTCATCGCCACAAACGGAGAG 891
|||||.||..|.||||||.|..|.||||||||||||||||||||.
RBAM_036350__ 1340 AAAAGAAAAGTTTTTATTGGTATAAAGACGTCATCGCCACAAACGGAGAA 1389
BSNT_06025 892 AGTCTCTGA 900
|||||.|.|
RBAM_036350__ 1390 AGTCTGTAA 1398
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.