Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06094 and RBAM_036730

See Amino acid alignment / Visit BSNT_06094 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:35
# Commandline: needle
#    -asequence dna-align/BSNT_06094___iolF.1.9828.seq
#    -bsequence dna-align/RBAM_036730___iolF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06094___iolF-RBAM_036730___iolF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06094___iolF-RBAM_036730___iolF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06094___iolF
# 2: RBAM_036730___iolF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1334
# Identity:     988/1334 (74.1%)
# Similarity:   988/1334 (74.1%)
# Gaps:          55/1334 ( 4.1%)
# Score: 3606.0
# 
#
#=======================================

BSNT_06094___      1 ATGGGCAATA---CCAATGGAGATTCAGCCTTCAATAAACGGACAATCGC     47
                     |||   ||||   ||||.|..||.|||||.||||..|||.||||.|||||
RBAM_036730__      1 ATG---AATAGTGCCAAGGCGGAATCAGCTTTCAGCAAAAGGACCATCGC     47

BSNT_06094___     48 GGCAGCATTGGCCAACTATATTGATGCCGGTTCAATTGTGGCAGGCTCCG     97
                     .||||||||.||.||.||.||||||||.|||||.||.||||||||.||.|
RBAM_036730__     48 CGCAGCATTAGCAAATTACATTGATGCGGGTTCCATCGTGGCAGGATCAG     97

BSNT_06094___     98 CCGGTTTATCATTATGGGTCAGTTACCTTAAGCTATCCGATACGCAAATC    147
                     |.||||||||..|.||||||||.|||.|.|||||.|||||.|..||.|||
RBAM_036730__     98 CGGGTTTATCTATGTGGGTCAGCTACTTGAAGCTGTCCGACAGCCAGATC    147

BSNT_06094___    148 GGGCTGCTTGGCGCGCTGAGCGCAAATGCGATTTCTGCCGCTGTCGGCGC    197
                     ||..||||.|||||..|.||||||||.|||||.||.||.||.|||||.||
RBAM_036730__    148 GGATTGCTCGGCGCCTTCAGCGCAAACGCGATATCAGCGGCCGTCGGAGC    197

BSNT_06094___    198 GCTGCTTGGCGGGTTTCTGGCTGATAAAGTCGGACGGAAGGCTGTTTATA    247
                     ||||||.|||||||.|.||||||||||.|||||.||.||.|||||.||.|
RBAM_036730__    198 GCTGCTCGGCGGGTATTTGGCTGATAAGGTCGGCCGAAAAGCTGTATACA    247

BSNT_06094___    248 CCAATAGTATGCTGGTTTATGCACTAGGGATTTGTTTGGTTTTGTTCGGG    297
                     |.||.||||||||.||.||.|...||||.|||||||||||||||||.||.
RBAM_036730__    248 CAAACAGTATGCTCGTCTACGTCTTAGGAATTTGTTTGGTTTTGTTTGGA    297

BSNT_06094___    298 GTTAATTTCCCCATGTTGTTAAGCGGTTACATCATTATCGGTTTATCAGT    347
                     .||||.||.||||||.|||||.||||.|||||.||||||||..|.||.||
RBAM_036730__    298 TTTAACTTTCCCATGCTGTTATGCGGATACATGATTATCGGGATTTCTGT    347

BSNT_06094___    348 AGGAGCTGATATAACCGCGTCATGGACCATTATTGCGGAAAATGCGCCAA    397
                     |||.||.|||||.||.||.||||||||||||||.||||||||.||.||..
RBAM_036730__    348 AGGCGCGGATATTACGGCTTCATGGACCATTATCGCGGAAAACGCCCCCG    397

BSNT_06094___    398 AGAAGAATCGGGCCAGGCATTGTGGCGTAGCACAAGTCGCTTGGGCCGCG    447
                     ||||.||.|||||.||||||||.||.||.||.||.||.||.||||||||.
RBAM_036730__    398 AGAAAAACCGGGCGAGGCATTGCGGAGTGGCGCAGGTGGCGTGGGCCGCA    447

BSNT_06094___    448 GGCGCTGTCGTTGTACTGTTCCTCTCCGTACTGGCCGGTGACTTGGGACT    497
                     ||.||.||.||.||.|||.|..|.|||||..|||.|||||||.|.||.||
RBAM_036730__    448 GGAGCCGTTGTGGTTCTGCTGTTATCCGTTTTGGTCGGTGACCTCGGGCT    497

BSNT_06094___    498 CTTGGGGAATAAAATCGTATTTGCCCATCTGCTTGTGATTGCGCTGATTA    547
                     .||.||.||||||||.||.|||||.|||||..|.|||||.||.|||||.|
RBAM_036730__    498 TTTAGGAAATAAAATTGTCTTTGCGCATCTATTGGTGATCGCCCTGATCA    547

BSNT_06094___    548 CGTACATCCTGAGAATCAGGCTT--CCGGAATCAGACGCCTGGCAGTCAA    595
                     |.||..|..|.||||  ||..||  ||.||.||.||.||||||      |
RBAM_036730__    548 CATATGTGATAAGAA--AGCGTTTACCTGAGTCGGATGCCTGG------A    589

BSNT_06094___    596 AAAATCAGCCGGAGGATGCTCAG-GCAGAGAAGCCGGCTGTACTGAGTAA    644
                     ||||                ||| |.||||..|||.||.|...|||..||
RBAM_036730__    590 AAAA----------------CAGTGAAGAGCGGCCTGCCGCCGTGAAAAA    623

BSNT_06094___    645 GACATCATATTTTGATTTGCTCAAGCCTATGTATCTCAAAAGCATACTGT    694
                     .|||||.||||||||..||||..||||.|..|.|.||||.|.|||..|||
RBAM_036730__    624 AACATCTTATTTTGACCTGCTTCAGCCGAAATTTTTCAAGAACATTTTGT    673

BSNT_06094___    695 TTTTGATGGGTGTGTACTTGGTTTGGAACTTAGCCGCCGGGGTCATGGGC    744
                     ||||.||||||||||...|.||.|||||..|.|||||.||.||||||||.
RBAM_036730__    674 TTTTAATGGGTGTGTTTCTCGTATGGAATCTCGCCGCGGGCGTCATGGGA    723

BSNT_06094___    745 TTCTTTATGCCATACATTTATCAGCAGGTCGGCGGTGTATCTGCCAACAT    794
                     |||||.|||||.|||||.||.||||||||||||||.|||||.||.||.|.
RBAM_036730__    724 TTCTTCATGCCGTACATCTACCAGCAGGTCGGCGGCGTATCCGCAAATAC    773

BSNT_06094___    795 GGCCAACCTTTTGCAAATGGGGCTGTTTATCTTCACAGGATTGGGGGTCG    844
                     |||||||.||.||||.||||..||||||||||||||.||..|.||.||||
RBAM_036730__    774 GGCCAACATTCTGCAGATGGCCCTGTTTATCTTCACCGGGCTCGGCGTCG    823

BSNT_06094___    845 CTTTGATCTTCATGCCCTTTGCCGACAAATATAGAAAAACCGTATTTGGA    894
                     |.|..|||||||||||.|||||.||.||||||.|.|||||.||.||.|||
RBAM_036730__    824 CCTGTATCTTCATGCCTTTTGCAGATAAATATCGGAAAACGGTGTTCGGA    873

BSNT_06094___    895 ATCGCCGCTTTCATGGCGGTGATCGGGTGGACACTGTTTCTGCTGCCAGT    944
                     |||..|||....|||||.||..||||.|||.|.||||||.|.|||||..|
RBAM_036730__    874 ATCTGCGCAAGTATGGCCGTTGTCGGCTGGTCGCTGTTTTTACTGCCGTT    923

BSNT_06094___    945 TGAAGGCCTGCCGATTCTGCTCCTGTTTATTGTCGTGATCGGCATCAATA    994
                     |.|.||.||.|||||.|||||..|||||.||.|.|.||||||||||||||
RBAM_036730__    924 TCAGGGGCTCCCGATGCTGCTTTTGTTTGTTTTAGCGATCGGCATCAATA    973

BSNT_06094___    995 ACGGAGCCGGGCAGCAAGCGAACTATCAGTTATGGGCCAGCGAAATCTTT   1044
                     ||||||||||.|||||.||||||||.|||.|.|||||.|||||..|.||.
RBAM_036730__    974 ACGGAGCCGGCCAGCAGGCGAACTACCAGCTGTGGGCAAGCGAGCTGTTC   1023

BSNT_06094___   1045 CCTACGCAATATCGTGCTTCCGCACAAGGACTGATGTTTTTCCTTGTCCG   1094
                     ||.||..||.|..|.||.||.||||||||.||.|||||.||.||.|||||
RBAM_036730__   1024 CCGACAGAACACAGAGCGTCAGCACAAGGGCTCATGTTCTTTCTCGTCCG   1073

BSNT_06094___   1095 TATTTCAATAGGGATTTGGAGTCTGTTTGTCCCAATGAT--TATCACCAA   1142
                     |||||||||.||.|||||||||.|.|||||.||..|.||  |.||||  |
RBAM_036730__   1074 TATTTCAATCGGAATTTGGAGTTTATTTGTGCCGGTCATCATGTCAC--A   1121

BSNT_06094___   1143 TTTCGGCATTGGAACGATGGCTGCAATTCTTCTCGGATGTGTGACGGCCA   1192
                     .||||||||.||....|||||.|..|||||.|||..||||||||||||||
RBAM_036730__   1122 ATTCGGCATCGGTTTTATGGCCGGTATTCTGCTCATATGTGTGACGGCCA   1171

BSNT_06094___   1193 GTATGATCATCGGGCTGCTCTTTGCGCCGAATACGTCTGGCAAGTCGCTT   1242
                     ||||||||||||||||..|.||.||.|||||||||||.||||||||||||
RBAM_036730__   1172 GTATGATCATCGGGCTTGTTTTCGCACCGAATACGTCCGGCAAGTCGCTT   1221

BSNT_06094___   1243 GAGCAAATTCAAGAGGAACTCTACGGATCTCCTCAG---AGCCAAGTAAA   1289
                     ||.||.||.||.||||||||.|||||..||||||||   .||       |
RBAM_036730__   1222 GAACAGATACAGGAGGAACTGTACGGCGCTCCTCAGGACGGC-------A   1264

BSNT_06094___   1290 GCAAGAAACAGAAAGCA----AA--ATAATGTAA   1317
                     ||.||||| |||||| |    ||  ||.||.|.|
RBAM_036730__   1265 GCGAGAAA-AGAAAG-ACGAGAACCATTATTTGA   1296


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