Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06095 and RBAM_036740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence dna-align/BSNT_06095___iolE.1.9828.seq
# -bsequence dna-align/RBAM_036740___iolE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06095___iolE-RBAM_036740___iolE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06095___iolE-RBAM_036740___iolE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06095___iolE
# 2: RBAM_036740___iolE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 923
# Identity: 672/923 (72.8%)
# Similarity: 672/923 (72.8%)
# Gaps: 55/923 ( 6.0%)
# Score: 2377.5
#
#
#=======================================
BSNT_06095___ 1 ATGGGCAAAAATGAAATCCTGTGGGGAATCGCTCCCATTGGGTGGCGGAA 50
|||||||||.|.||.||.||||||||.||||||||||||||||||||.||
RBAM_036740__ 1 ATGGGCAAACAAGATATTCTGTGGGGCATCGCTCCCATTGGGTGGCGCAA 50
BSNT_06095___ 51 TGATGACATGCCTGAAATTGGAGCGGGAAATACACTTCAGCATTTGTTAA 100
|||.||.|||||.|||||.|||||.||.|||||.||.|||||||||||||
RBAM_036740__ 51 TGACGATATGCCGGAAATCGGAGCCGGGAATACGCTGCAGCATTTGTTAA 100
BSNT_06095___ 101 GTGATATCGTTGTCGCACGTTTTCAAGGCACGGAGGTCGGGGGCTTTTTC 150
|.|||||.||||||||..|.||||||||.|||||.||.||.||.||||||
RBAM_036740__ 101 GCGATATTGTTGTCGCCGGCTTTCAAGGTACGGAAGTGGGAGGGTTTTTC 150
BSNT_06095___ 151 CCCGAACCTGCCATCCTGAACAAAGAGCTGAAGCTTCGGAACTTACGCAT 200
||.|||||..||.||||.||.||.||||||...||.||||||||.||.||
RBAM_036740__ 151 CCTGAACCCTCCGTCCTCAATAAGGAGCTGGCTCTCCGGAACTTGCGGAT 200
BSNT_06095___ 201 TGCAGGAAAATGGTTCAGCAGTTTTATTTTGCGTGACGGACTTGGTGAAG 250
|||.||.||||||||||||||.|||||..|.|..|||||..|||...||.
RBAM_036740__ 201 TGCGGGGAAATGGTTCAGCAGCTTTATCATACAAGACGGTATTGAAAAAA 250
BSNT_06095___ 251 CGGCAAAGAC-ATTTACCCTGCATTGTGAGTATTTGCAGCAAGTAAACGC 299
.|||..| || ||||||....||.|||||.|||||||||.||||....||
RBAM_036740__ 251 TGGCTGA-ACAATTTACAGAACACTGTGATTATTTGCAGAAAGTCGGAGC 299
BSNT_06095___ 300 GGATGTCGCAGTTGTCTCTGAACAAACGTACAGCGTGCAAGGCTTGGAGA 349
|||||||||..|.||.||||||||.|||||||||||.||.||||||||.|
RBAM_036740__ 300 GGATGTCGCCATCGTTTCTGAACAGACGTACAGCGTTCAGGGCTTGGACA 349
BSNT_06095___ 350 AAAATGTGTTCACAGAGAAGCCGCACTTTACGGATGATGAATGGGAGCGG 399
...||||.||.|..||.||.||||||||..|.|||||.||||||||...|
RBAM_036740__ 350 TTGATGTATTTAAGGAAAAACCGCACTTCTCAGATGAAGAATGGGATACG 399
BSNT_06095___ 400 CTTTGCGAAGGGCTGAATCACCTTGGCGAAATTGCCGCTCAGCATGGCTT 449
||.|||.||||..||||.|..||.||..||||.|| ||||
RBAM_036740__ 400 CTGTGCCAAGGCTTGAACCGTCTCGGGAAAATCGC---------TGGC-- 438
BSNT_06095___ 450 GAA-----GCTTGTC------TATCATCATCATCTCGGCACTGGTGTCCA 488
||| |||.|.| |.||||||||||||||||||.||.|||||
RBAM_036740__ 439 GAATACGGGCTGGACCTCACGTTTCATCATCATCTCGGCACAGGCGTCCA 488
BSNT_06095___ 489 AACAGCGGAAGAAGTGGACCGCCTGATGGCAGGAACAGACCCTGC-GCAT 537
.||.|||||||||||.|||||.|||||||..|||||.||||| || |.||
RBAM_036740__ 489 GACGGCGGAAGAAGTTGACCGGCTGATGGATGGAACGGACCC-GCGGTAT 537
BSNT_06095___ 538 GTACACCTCCTCTATGATACAGGCCATGCGTATATTTCTGACGGCGATTA 587
||.||..|.||.||||||||.||||||||.|||||.||.|||||.||.||
RBAM_036740__ 538 GTCCATTTACTTTATGATACCGGCCATGCCTATATCTCGGACGGAGACTA 587
BSNT_06095___ 588 CATGGGGATGCTTGAGAAGCATATCGGCCGCATTAAGCATGTGCACTTTA 637
.|||..|||.||..|.||||||||.|..||.||.|..||.||.||.||.|
RBAM_036740__ 588 TATGACGATTCTCAACAAGCATATGGATCGGATCAGACACGTTCATTTCA 637
BSNT_06095___ 638 AGGATGCCCGCCTGAATGTCATGGAACAATGCAGGCTCGAAGGACAA-TC 686
||||.|||||..|..|..|.|||||.|..|||||.|..||||| ||| ||
RBAM_036740__ 638 AGGACGCCCGGTTTGACATTATGGAGCGGTGCAGACAGGAAGG-CAAGTC 686
BSNT_06095___ 687 GTTCCGGCAATCATTTTTAAAAGGCATGTTTACGGTTCCCGGTGATGGCT 736
.|||.||||.||.||||||.|.|||||.||||||||||||||.||.||.|
RBAM_036740__ 687 ATTCAGGCAGTCGTTTTTACAGGGCATTTTTACGGTTCCCGGCGACGGAT 736
BSNT_06095___ 737 GCATTGACTTTAGAGAAGTATATC-AGCTGCT-----GT--TGAAGCACA 778
||||.||.||||..||||||||.| |.| ||| || |||
RBAM_036740__ 737 GCATCGATTTTACCGAAGTATACCGAAC-GCTCGTCCGTCATGA------ 779
BSNT_06095___ 779 GTTATTCCGGATGGATTGTCATTGAAGCTGAACAGGACCCCGATGTTGCC 828
||||||.||.|||||.|||||.|||||.|||||.|||||.|..||.|||
RBAM_036740__ 780 -TTATTCAGGCTGGATCGTCATCGAAGCCGAACAAGACCCGGCAGTCGCC 828
BSNT_06095___ 829 AACCCGCTGGAGTATGCATTGATTGCGAGAAACTATATTGATCAGCAGT- 877
||.|||||.|||||.||..|||||||.|||||.||.||.|| ||||
RBAM_036740__ 829 AATCCGCTTGAGTACGCGCTGATTGCAAGAAAGTACATCGA----CAGTG 874
BSNT_06095___ 878 ---TGTTGGATCTGGC---TTAA 894
||.|.||||..|| |||.
RBAM_036740__ 875 AACTGCTTGATCCTGCAAATTAG 897
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