Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06199 and RBAM_037390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:39
# Commandline: needle
# -asequence dna-align/BSNT_06199___yycG.1.9828.seq
# -bsequence dna-align/RBAM_037390___yycG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06199___yycG-RBAM_037390___yycG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06199___yycG-RBAM_037390___yycG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06199___yycG
# 2: RBAM_037390___yycG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1836
# Identity: 1502/1836 (81.8%)
# Similarity: 1502/1836 (81.8%)
# Gaps: 0/1836 ( 0.0%)
# Score: 6174.0
#
#
#=======================================
BSNT_06199___ 1 ATGAATAAGGTTGGTTTTTTTCGGTCGATCCAATTTAAGATTACCTTGAT 50
|||||||||||||||||||||||||||||.|||||||||||.||..||||
RBAM_037390__ 1 ATGAATAAGGTTGGTTTTTTTCGGTCGATTCAATTTAAGATCACGCTGAT 50
BSNT_06199___ 51 TTATGTGCTTTTGATTATCATTGCCATGCAAATCATTGGTGTGTATTTTG 100
.|||||||||.|.||||||||.||||||||.||.||.||.|||||.||||
RBAM_037390__ 51 CTATGTGCTTCTCATTATCATCGCCATGCAGATTATCGGCGTGTACTTTG 100
BSNT_06199___ 101 TCAATCAGGTAGAGAAGTCGCTGATCAGCTCTTATGAACAATCGTTGAAT 150
|.||.|||||.|||||.||.||..|||..||.||||||..||||||.|||
RBAM_037390__ 101 TGAAACAGGTGGAGAATTCTCTTCTCAAGTCCTATGAATTATCGTTAAAT 150
BSNT_06199___ 151 CAGCGAATCGACAACCTTTCTTATTATATCGAACAAGAATATAAGAGCGA 200
|||||.||.|||||.||.||.||||||||.||.||.||||||||..|.||
RBAM_037390__ 151 CAGCGCATTGACAATCTATCCTATTATATTGAGCAGGAATATAAAGGAGA 200
BSNT_06199___ 201 TAACGACAGTACCGTCATAAAGGATGACGTCAGCCGTATTTTGAATGACT 250
|||.|||||.||||||||.||.||||||||||..||.|||||||||||.|
RBAM_037390__ 201 TAATGACAGCACCGTCATTAAAGATGACGTCAAACGGATTTTGAATGATT 250
BSNT_06199___ 251 TCACGAAAAGTGATGAGGTTCGGGAAATTAGCTTTGTAGATAAAAGCTAT 300
|.|||||||...||||..|.|||||.||||..|||||.||||||||||||
RBAM_037390__ 251 TTACGAAAAACAATGAAATACGGGAGATTACATTTGTTGATAAAAGCTAT 300
BSNT_06199___ 301 GAAGTGGTCGGTTCTTCAAAGCCGTACGGTGAGGAAGTGGCTGGGAAACA 350
||.||.|||||||||||.|.|||.||.||.||||||.|.||.||||||||
RBAM_037390__ 301 GAGGTCGTCGGTTCTTCGAGGCCTTATGGCGAGGAAATAGCGGGGAAACA 350
BSNT_06199___ 351 AACGACCGATCTGATTTTCAAAAGAATTTTTTCTACCAAACAGTCGTATT 400
.|||||.||.|.||||||.|||.|.|||||.||.||.||||||.|.||||
RBAM_037390__ 351 GACGACTGACCCGATTTTTAAACGGATTTTCTCAACAAAACAGGCCTATT 400
BSNT_06199___ 401 TAAGAAAATATTATGACCCGAAAAGCAAAATCAGAGTTCTTATTTCCGCG 450
.||.||||||||||||.||.||||||||||.||||||.||.|||||.||.
RBAM_037390__ 401 CAAAAAAATATTATGATCCTAAAAGCAAAAACAGAGTGCTGATTTCAGCA 450
BSNT_06199___ 451 AAGCCCGTCATGACTGAAAATCAAGAGGTTGTGGGCGCGATCTATGTTGT 500
||.||.|||.|.||.||.|||||.||.|||||.||||||||.|||||.||
RBAM_037390__ 451 AAACCTGTCGTCACAGAGAATCAGGAAGTTGTCGGCGCGATATATGTCGT 500
BSNT_06199___ 501 CGCGAGTATGGAAGATGTCTTTAATCAAATGAAGACGATCAACACGATAC 550
.||.||||||||||||..||||||.||.|||||.||..|||||.||||.|
RBAM_037390__ 501 GGCCAGTATGGAAGATACCTTTAACCAGATGAAAACCGTCAACTCGATTC 550
BSNT_06199___ 551 TGGCGTCCGGCACAGGTTTGGCACTTGTTTTGACGGCTCTTCTTGGTATT 600
|.||.||.||.|||||.||.||.||||||.|||||||||||||.|||||.
RBAM_037390__ 551 TTGCTTCAGGAACAGGCTTAGCCCTTGTTCTGACGGCTCTTCTCGGTATA 600
BSNT_06199___ 601 TTTCTGGCAAGAACCATTACCCACCCACTTTCAGATATGCGAAAGCAGGC 650
|||||.||..|.|||||||||||.||.||.||.||||||||.||||||||
RBAM_037390__ 601 TTTCTCGCCCGCACCATTACCCATCCGCTGTCGGATATGCGTAAGCAGGC 650
BSNT_06199___ 651 GATGGAGCTTGCGAAAGGGAATTTCTCGAGGAAGGTTAAAAAGTACGGGC 700
||||||.||.||.||||||||||||||.||.|||||....||.|||||||
RBAM_037390__ 651 GATGGAACTGGCAAAAGGGAATTTCTCCAGAAAGGTGCGGAAATACGGGC 700
BSNT_06199___ 701 ATGATGAAATTGGGCAGCTGGCCACAACGTTTAACCACTTAACGAGAGAG 750
||||||||||.||.|||||.||.||.|||||.|||||..|.|||||||||
RBAM_037390__ 701 ATGATGAAATCGGTCAGCTCGCAACGACGTTCAACCATCTGACGAGAGAG 750
BSNT_06199___ 751 CTTGAAGATGCCCAGGCGATGACTGAAGGAGAACGCAGAAAGCTAGCCTC 800
||||||||||||||.||.|||||.|||||.||..|.||||||||..|.||
RBAM_037390__ 751 CTTGAAGATGCCCAAGCCATGACGGAAGGGGAGAGAAGAAAGCTTTCTTC 800
BSNT_06199___ 801 TGTCATTGCTTATATGACAGACGGCGTTATCGCCACAAACCGAAACGGAG 850
.||.||.||.||||||||.|||||.||.|||||.||.||.||.||.||||
RBAM_037390__ 801 CGTTATCGCGTATATGACGGACGGTGTCATCGCTACGAATCGCAATGGAG 850
BSNT_06199___ 851 CGATTATTCTCTTAAACAGCCCGGCGCTGGAACTGTTGAACGTTTCACGT 900
|.||||||||.|||||||||||.|||||.||.|||.||||.|||||||||
RBAM_037390__ 851 CTATTATTCTTTTAAACAGCCCTGCGCTTGAGCTGCTGAATGTTTCACGT 900
BSNT_06199___ 901 GAAACAGCCTTAGAAATGCCGATTACGAGTTTGCTGGGGCTTCAAGAGAA 950
|||||.||.|||||.||||||||||||..|||..|.||..|..|||||||
RBAM_037390__ 901 GAAACGGCTTTAGAGATGCCGATTACGTCTTTATTAGGCATAAAAGAGAA 950
BSNT_06199___ 951 TTATACTTTTGAAGATTTAGTGGAGCAGCAGGATTCTATGCTGCTTGAAA 1000
.|.|||.|||||.||||||||.||.|||||||||||.||||||||.||.|
RBAM_037390__ 951 CTTTACATTTGAGGATTTAGTAGAACAGCAGGATTCCATGCTGCTGGAGA 1000
BSNT_06199___ 1001 TTGAGCGCGATGATGAATTAACGGTGCTTCGCGTGAATTTCTCTGTGATT 1050
|.||.||.||.||||||...||.||.||.||.||||||||.||.||.|||
RBAM_037390__ 1001 TCGAACGTGACGATGAAACGACTGTACTGCGGGTGAATTTTTCCGTTATT 1050
BSNT_06199___ 1051 CAAAGGGAACACGGCAAAATTGATGGTTTAATCGCTGTCATTTACGATGT 1100
||.||.||.|||||.|||||.||.|||||||||||.||..||||.|||||
RBAM_037390__ 1051 CAGAGAGAGCACGGAAAAATCGACGGTTTAATCGCGGTTCTTTATGATGT 1100
BSNT_06199___ 1101 AACCGAACAAGAGAAAATGGATCAGGAACGCAGAGAATTCGTTGCGAATG 1150
.||||||||.||.|||.|.||||.||||||||||||.||||||||.||.|
RBAM_037390__ 1101 CACCGAACAGGAAAAACTCGATCGGGAACGCAGAGAGTTCGTTGCCAACG 1150
BSNT_06199___ 1151 TATCACATGAGCTGCGGACGCCGCTTACGACAATGCGCAGCTATTTAGAA 1200
|.||.||||||||||||||.|||||.|||||.|||||.|||||||||||.
RBAM_037390__ 1151 TGTCTCATGAGCTGCGGACACCGCTGACGACCATGCGAAGCTATTTAGAG 1200
BSNT_06199___ 1201 GCGTTAGCCGAAGGCGCGTGGGAAAATAAAGACATTGCTCCGCGCTTCTT 1250
|||.|.||.|||||||||||||||||||||||.||.||||||||.|||.|
RBAM_037390__ 1201 GCGCTTGCAGAAGGCGCGTGGGAAAATAAAGATATCGCTCCGCGTTTCCT 1250
BSNT_06199___ 1251 AATGGTGACGCAAAATGAAACAGAGCGTATGATCCGACTTGTCAATGATC 1300
|||||||||.||||||||.||.|||||.||||||.||.|.||.||.||.|
RBAM_037390__ 1251 AATGGTGACCCAAAATGAGACTGAGCGCATGATCAGATTGGTGAACGACC 1300
BSNT_06199___ 1301 TGCTTCAGCTGTCGAAATTTGACAGTAAGGATTACCAATTTAACCGGGAA 1350
||||||||||.||.|||||.|||||.||.|||||.||.|||||.|||||.
RBAM_037390__ 1301 TGCTTCAGCTTTCTAAATTCGACAGCAAAGATTATCAGTTTAATCGGGAG 1350
BSNT_06199___ 1351 TGGATTCAGATTGTCCGGTTTATGTCACTTATTATTGACCGTTTTGAAAT 1400
||||||||.||..||||.|||||||||||.|||||.||.|||||||||||
RBAM_037390__ 1351 TGGATTCATATGATCCGCTTTATGTCACTGATTATCGATCGTTTTGAAAT 1400
BSNT_06199___ 1401 GACAAAAGAGCAGCATGTGGAGTTTATCCGCAATCTGCCGGACAGAGATC 1450
|||||||||.||||||||.||.|||||||||.|.||.|||||||||.|||
RBAM_037390__ 1401 GACAAAAGAACAGCATGTCGAATTTATCCGCGAGCTTCCGGACAGAAATC 1450
BSNT_06199___ 1451 TGTATGTCGAGATTGACCAGGACAAAATAACGCAGGTGCTCGATAATATT 1500
||||.||.||||||||.|||||.|||.|.||||||||.|||||||||||.
RBAM_037390__ 1451 TGTACGTGGAGATTGATCAGGATAAAGTGACGCAGGTTCTCGATAATATC 1500
BSNT_06199___ 1501 ATTTCTAATGCTTTAAAATATTCACCGGAAGGCGGACATGTCACGTTCTC 1550
||||||||.||..|.|||||.|||||||||||||||||||||||.|||||
RBAM_037390__ 1501 ATTTCTAACGCACTGAAATACTCACCGGAAGGCGGACATGTCACTTTCTC 1550
BSNT_06199___ 1551 TATTGATGTCAATGAAGAGGAAGAACTTCTCTATATCAGCGTGAAGGATG 1600
..|.|||||.|||||..|.|||||.||.||.|||||||||||.||.||||
RBAM_037390__ 1551 AGTCGATGTGAATGAGAAAGAAGAGCTGCTTTATATCAGCGTAAAAGATG 1600
BSNT_06199___ 1601 AAGGGATCGGCATTCCAAAAAAAGATGTCGAAAAAGTCTTTGACCGCTTC 1650
||||.|||||||||||.|||||||||||.|||||||||||||||||.|||
RBAM_037390__ 1601 AAGGTATCGGCATTCCGAAAAAAGATGTGGAAAAAGTCTTTGACCGTTTC 1650
BSNT_06199___ 1651 TACAGGGTGGATAAAGCGAGAACGAGAAAGCTTGGCGGCACTGGTCTGGG 1700
|||||.||||||||||||.|.||||||||.||.||||||||.||.||.||
RBAM_037390__ 1651 TACAGAGTGGATAAAGCGCGCACGAGAAAACTCGGCGGCACCGGGCTCGG 1700
BSNT_06199___ 1701 ATTGGCGATTGCCAAGGAAATGGTACAGGCGCACGGTGGAGATATTTGGG 1750
..|.||||||||.||.||.|||||.|||||||||||.|||||.|||||||
RBAM_037390__ 1701 CCTTGCGATTGCAAAAGAGATGGTTCAGGCGCACGGCGGAGACATTTGGG 1750
BSNT_06199___ 1751 CGGACAGCATAGAAGGAAAAGGCACGACGATAACATTTACTCTTCCATAT 1800
|.|||||..|||||||.|||||.||||.|||.||||||||||||||||||
RBAM_037390__ 1751 CCGACAGTGTAGAAGGCAAAGGAACGAAGATTACATTTACTCTTCCATAT 1800
BSNT_06199___ 1801 AAAGAGGAACAAGAGGATGATTGGGATGAAGCGTGA 1836
|||||.||.||||||||||||||||||||.||||||
RBAM_037390__ 1801 AAAGAAGAGCAAGAGGATGATTGGGATGAGGCGTGA 1836
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