Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06215 and RBAM_037480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence dna-align/BSNT_06215___yycD.1.9828.seq
# -bsequence dna-align/RBAM_037480___yycD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06215___yycD-RBAM_037480___yycD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06215___yycD-RBAM_037480___yycD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06215___yycD
# 2: RBAM_037480___yycD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 155/201 (77.1%)
# Similarity: 155/201 (77.1%)
# Gaps: 3/201 ( 1.5%)
# Score: 603.0
#
#
#=======================================
BSNT_06215___ 1 ATGATAAAGAAATATGCGATTACGCCTAATGTTGATGCGGACGGCTGGTT 50
||.||.|.||||||..|.||.||.|.|||||||||||||||.|||||
RBAM_037480__ 1 ---ATGAAAACATATGCAGTAACACCCAGTGTTGATGCGGACGGATGGTT 47
BSNT_06215___ 51 TATTGAGGTGGAGAATGTAGCGCCGACAGCTTTGTATACGTCTAAAGACG 100
|.|..|||||||.|||||.||||||||.|||.|.|||||.||.||.||||
RBAM_037480__ 48 TGTGAAGGTGGAAAATGTGGCGCCGACGGCTCTTTATACATCAAAGGACG 97
BSNT_06215___ 101 CCGCTATTGAAAAGGCCAAACAGGTGGCTAAGGAAAACAGTCCGTCTAAG 150
|.||.|||||.||.||..|.|||..||||||.||.|||||.|||||||||
RBAM_037480__ 98 CGGCGATTGAGAAAGCGGAGCAGACGGCTAAAGATAACAGCCCGTCTAAG 147
BSNT_06215___ 151 CTTGTAATTTATGACCAGTTTAAAAATGTGGAAGAAGAACACTCATTTTA 200
|||||.||||||||.|||..||||||..|.||||||||||..||.|||||
RBAM_037480__ 148 CTTGTCATTTATGATCAGCATAAAAACATTGAAGAAGAACGGTCCTTTTA 197
BSNT_06215___ 201 A 201
|
RBAM_037480__ 198 A 198
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