Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06217 and RBAM_037490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence dna-align/BSNT_06217___yyzB.1.9828.seq
# -bsequence dna-align/RBAM_037490___yyzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06217___yyzB-RBAM_037490___yyzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06217___yyzB-RBAM_037490___yyzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06217___yyzB
# 2: RBAM_037490___yyzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 132/232 (56.9%)
# Similarity: 132/232 (56.9%)
# Gaps: 50/232 (21.6%)
# Score: 304.0
#
#
#=======================================
BSNT_06217___ 1 ATGCACGCACCGTT-ATCCTTATTAAAACAAATGCTGAAG---------G 40
|||||..|.||.|| || .||||||.| ||||||| .
RBAM_037490__ 1 ATGCAATCGCCATTGAT-GTTATTACA------GCTGAAGCTGGCTGATT 43
BSNT_06217___ 41 AACACCAAATAGACACTGAAAAAGCTGTCACTTTCGAAGAATATATAGCA 90
|.||..|||.||.|.|.| ||..||.|.||.|| ||.||||.|||...|
RBAM_037490__ 44 ATCAGAAAAAAGCCGCAG-AACTGCGGACAATT--GACGAATTTATCATA 90
BSNT_06217___ 91 ATGAGGCTAAAGCTT-CAGGAGCTGATGGGGAA---ATTTGCTTCGATCG 136
.|||..| |.|..|| |||||..|||| ||| |||.|| ||...|
RBAM_037490__ 91 CTGAAAC-AGACATTGCAGGATATGAT---GAAAGTATTCGC--CGCCTG 134
BSNT_06217___ 137 GG--GAGTGGGATCTGTATCAAAAAGCGGCAGATTT------------GA 172
.| ||.|||||.||||||||||||.||||.|||.| |.
RBAM_037490__ 135 TGAAGAATGGGAGCTGTATCAAAAAACGGCCGATCTCATGGCGCAGACGG 184
BSNT_06217___ 173 TGATGCACATAGGCATCCAATGGATGAAATAA 204
||.|||||||..|..|| ||.|||.||
RBAM_037490__ 185 TGCTGCACATCCGTTTC--ATCGATTAA---- 210
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