Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00867 and BL00018

See DNA alignment / Visit BSNT_00867 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence pep-align/BSNT_00867.1.5803.seq
#    -bsequence pep-align/BL00018___yecA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00867-BL00018___yecA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00867-BL00018___yecA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00867
# 2: BL00018___yecA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity:     198/429 (46.2%)
# Similarity:   283/429 (66.0%)
# Gaps:          23/429 ( 5.4%)
# Score: 1013.0
# 
#
#=======================================

BSNT_00867         1 MREKKLGPVLLSGLIVGPILGSGIILLPPIIYGKTGDYAILAWFIMMIIS     50
                     ||||||||:|||||:.|||||||||||||:|:...|||||.||.:|:.|.
BL00018___yec      1 MREKKLGPLLLSGLMTGPILGSGIILLPPMIHQTAGDYAIFAWLLMLGIG     50

BSNT_00867        51 FLFASLFGKLSVLFPNESGVAHTVELAFGQHIKQLTSVFFIIAGSVGPVA    100
                     ||||.:|.:|||.:||::|:|:..|.|||..:|:|...:||:|.|.||.|
BL00018___yec     51 FLFAWVFARLSVEYPNDAGIAYAAEKAFGSRVKKLAVFYFIMAASFGPAA    100

BSNT_00867       101 VLMTASQYLKALFKSNGWSLETYGIILMMICLFVLLSNISSVGKVSFMFS    150
                     |||||.:|:.:|.....:..|.||.:..:.|:.:|..|:|.||.|:.:||
BL00018___yec    101 VLMTAGEYIHSLAAGTAFPAELYGFVFFIFCMVILCFNLSFVGMVALIFS    150

BSNT_00867       151 TVSTVVLLSGGISSIPFMRDKAFIKTPFHLDDFGYSILLLFWALVGWEII    200
                     |.:.::|.....:|:|:.|:...:...|...|||..:||||||||||||:
BL00018___yec    151 TAAALILFGSSAASVPYFREGPLVDGTFQFTDFGRGLLLLFWALVGWEIV    200

BSNT_00867       201 GNYSLDVKNRKRTIPQAIVISSVVITTVCIVVAAAYQWID----LHHTHT    246
                     ||||::||||.:|||:|:||||:.:|.:.:..|||.||||    .:....
BL00018___yec    201 GNYSMEVKNRGKTIPRAVVISSLTVTVIYLATAAAVQWIDPGFSANGQLK    250

BSNT_00867       247 LTIILIPLLGTSFASPTMAFITTILCMSTYLLVTGGVSRLIASENKKITL    296
                     |.::|.||.| |||.|.:|.:|.:|||..|..||||.:||:||:..  .|
BL00018___yec    251 LAMMLTPLFG-SFALPVIAVLTAVLCMCAYFQVTGGAARLVASQAG--GL    297

BSNT_00867       297 ISYRSKTNIPIGAISILTLVHAIVFILLFINIINVEQIVGMANAFFISNA    346
                     .:|||:.|.|..|:.::.|:|.|||:.|..:.:|||.:|.:||||||.|:
BL00018___yec    298 FAYRSRGNQPTAALGLIFLIHTIVFVCLMFHFLNVETLVLIANAFFICNS    347

BSNT_00867       347 ICGILSAYKLLPGKFSKSLSLMLIISFLIILSFSSIWILLMIALITTFYL    396
                     :||:.:|||||.|:..|.:.|.|:..|.::|.|||.|:||.|.|.:..::
BL00018___yec    348 LCGLAAAYKLLSGRIYKKVCLFLMGGFTLLLLFSSSWVLLFIMLASALFV    397

BSNT_00867       397 IRHF----IW--IRQLKKSATNSQDKLRF    419
                     : :|    ||  :::..||.         
BL00018___yec    398 V-NFRQLNIWKKVKRPFKSY---------    416


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