Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04388 and BL00024
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence pep-align/BSNT_04388___yteR.1.5803.seq
# -bsequence pep-align/BL00024___yteR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04388___yteR-BL00024___yteR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04388___yteR-BL00024___yteR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04388___yteR
# 2: BL00024___yteR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 247/373 (66.2%)
# Similarity: 294/373 (78.8%)
# Gaps: 3/373 ( 0.8%)
# Score: 1382.0
#
#
#=======================================
BSNT_04388___ 1 MDQSIAVKSPLTYAEALAKTIMNTYTVEELPPANRWHYHQGVFLCGVLRL 50
|:||:..||||..||..|||||..||.:|||||.||||||||||||::||
BL00024___yte 1 MNQSLITKSPLYIAEEAAKTIMKAYTPKELPPAGRWHYHQGVFLCGLIRL 50
BSNT_04388___ 51 WEATGEKRYFEYAKAYADLLIDDYGNLLFRRDELDAIQAGLILFPLYEQT 100
||.||::.||:|.|.|||.||||.||..|||||||||||||:|:||||:|
BL00024___yte 51 WEETGKEAYFKYVKEYADDLIDDCGNFYFRRDELDAIQAGLLLYPLYEET 100
BSNT_04388___ 101 KDERYVKAAKRLRGLYRTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFAL 150
.||||.||||:||||:.|||:|.||||||||.||||||||||||||||||
BL00024___yte 101 GDERYRKAAKKLRGLFETLNQTEEGGFWHKDKYPYQMWLDGLYMGGPFAL 150
BSNT_04388___ 151 KYANLKQEPELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEE 200
|||....||||:|:|:|:|.||||||||.:|||:||||||.::||||:..
BL00024___yte 151 KYARAFNEPELYDKVILEEKLMRKHTKDCRTGLYYHAWDEKRQMPWADPV 200
BSNT_04388___ 201 TGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLRDMIKSICRY 250
:|||||||.||||||.::|:||||.||:.|..|..|..||::|:|||..:
BL00024___yte 201 SGCSPEFWGRSIGWYALALSDMIELLPQGHSTRQEWTRTLQEMVKSIADF 250
BSNT_04388___ 251 QDKETGLWYQIVDKGDRSDNWLESSGSCLYMYALAKGINQGYLDRAYETT 300
||:.||||:|:||||...|||||||.|||||||:|||...||:|.:|...
BL00024___yte 251 QDESTGLWHQVVDKGGLPDNWLESSCSCLYMYAMAKGARMGYIDSSYIDR 300
BSNT_04388___ 301 LLKAYQGLIQHKTETSEDGAFLVKDICVGTSAGFYDYYVSRERSTNDLHG 350
..||::||::.|.|.|.....|:||||||||||.|||||.||:|||||||
BL00024___yte 301 ATKAFKGLVEEKIEMSAKEGLLLKDICVGTSAGTYDYYVGREKSTNDLHG 350
BSNT_04388___ 351 AGAFILAMTELEPLFR-SAGK-- 370
.||.::|..|||...| |.|:
BL00024___yte 351 VGALVMAFVELEKTGRFSCGEAK 373
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