Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04387 and BL00025

See DNA alignment / Visit BSNT_04387 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04387.1.5803.seq
#    -bsequence pep-align/BL00025___yteS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04387-BL00025___yteS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04387-BL00025___yteS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04387
# 2: BL00025___yteS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:      74/167 (44.3%)
# Similarity:    96/167 (57.5%)
# Gaps:          30/167 (18.0%)
# Score: 346.0
# 
#
#=======================================

BSNT_04387         1 ---------------------------MHVILFSDMQAGVQEKIKKAAEQ     23
                                                ..|::|||..|.|:|.:::|..:
BL00025___yte      1 MKNFAFSVLLIAAVLLLTSCGKDGSRGTDVLIFSDAPAEVKENVQRAVGK     50

BSNT_04387        24 NAGKIDIFPAFQEKLLTEITAHEGDVFIVPEDMFQAYDDPENFQPLNGLP     73
                     ....|.:|||..||||.||.|.|||:||||||||:.:.|||..||||...
BL00025___yte     51 EQLNITVFPATPEKLLVEIAAKEGDLFIVPEDMFKPFYDPEGLQPLNAAS    100

BSNT_04387        74 PKKTSPYTTVNKKTGEKTIYAVQIEKGKKRLNGYSFRLNRNMAAFIPVYA    123
                     .:| .||:... |.||..:||..||||:||||||:.:||.:|||||||||
BL00025___yte    101 EEK-EPYSAPG-KNGEVQLYAAVIEKGEKRLNGYTVQLNTDMAAFIPVYA    148

BSNT_04387       124 EKTEEALQLISQLTEAR    140
                     :||.||.:||..| :|:
BL00025___yte    149 KKTPEATELIEAL-QAK    164


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.