Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04377 and BL00033
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence pep-align/BSNT_04377___ytgP.1.5803.seq
# -bsequence pep-align/BL00033___ytgP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04377___ytgP-BL00033___ytgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04377___ytgP-BL00033___ytgP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04377___ytgP
# 2: BL00033___ytgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 544
# Identity: 406/544 (74.6%)
# Similarity: 482/544 (88.6%)
# Gaps: 2/544 ( 0.4%)
# Score: 2113.0
#
#
#=======================================
BSNT_04377___ 1 MSSKLLRGTFVLTLGTYISRILGMVYLIPFSIMVGATGGALFQYGYNQYT 50
||||||||||||||||||||||||:|||||..||||||||||||||||||
BL00033___ytg 1 MSSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYT 50
BSNT_04377___ 51 LFLNIATMGFPAAVSKFVSKYNSKGDYETSRKMLKAGMSVMLVTGMIAFF 100
:||:|||||||||||||||||||.|||||:|:||:||||:|||||:|||.
BL00033___ytg 51 IFLSIATMGFPAAVSKFVSKYNSMGDYETTRRMLRAGMSMMLVTGIIAFS 100
BSNT_04377___ 101 ILYLSAPMFAEISLGGKDNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGF 150
|||||||.|||::|||.:|||||::||||||||||||||||||::|:|||
BL00033___ytg 101 ILYLSAPFFAEMALGGTENNGLTLEHVVYVIRMVSLALLVVPILALIRGF 150
BSNT_04377___ 151 FQGHQMMGPTAVSQVVEQIVRIIFLLSATFLILKVFNGGLVIAVGYATFA 200
|||||||||||||||||||.||:|||:||:|::||.|||||:||||||||
BL00033___ytg 151 FQGHQMMGPTAVSQVVEQIARIVFLLTATYLVIKVLNGGLVVAVGYATFA 200
BSNT_04377___ 201 ALIGAFGGLVVLYIYWNKRKGSLLAMMPNTGPTANLSYKKMFFELFSYAA 250
||||||.||..||..|.||||:|||:.||..|:|:::|::||.|||||||
BL00033___ytg 201 ALIGAFAGLFTLYFSWQKRKGALLALKPNLVPSADITYRQMFKELFSYAA 250
BSNT_04377___ 251 PYVFVGLAIPLYNYIDTNTFNKAMIEAGHQAISQDMLAILTLYVQKLVMI 300
||||||||||||.||||||||||||.||:|.||||::||:||||.|||||
BL00033___ytg 251 PYVFVGLAIPLYQYIDTNTFNKAMIAAGYQNISQDLMAIVTLYVPKLVMI 300
BSNT_04377___ 301 PVSLATAFGLTLIPTITESFTSGNYKLLNQQINQTMQTILFLIIPAVVGI 350
||||||||||||||.:||:||:.::..||:||:|.||.|||:::||.||:
BL00033___ytg 301 PVSLATAFGLTLIPAVTENFTNKDFPALNKQIDQAMQIILFIVLPASVGM 350
BSNT_04377___ 351 SLLSGPTYTFFYGSESLHPELGANILLWYSPVAILFSLFTVNAAILQGIN 400
:|||||.||||||||||.||:|.:||.||:|||:||||||||||||||:|
BL00033___ytg 351 ALLSGPVYTFFYGSESLLPEMGRDILFWYAPVALLFSLFTVNAAILQGVN 400
BSNT_04377___ 401 KQKFAVVSLVIGVVIKLVLNVPLIKLMQADGAILATALGYIASLLYGFIM 450
|||||||||:||:|||:.||||||||:|..|:||||||||.|||||||||
BL00033___ytg 401 KQKFAVVSLMIGIVIKIALNVPLIKLLQGSGSILATALGYSASLLYGFIM 450
BSNT_04377___ 451 IKRHAGYSYKILVKRTVLMLVLSAIMGIAVKIVQWVLGFFISYQDGQLQA 500
|||||||||:.|.||.:|||:|:|:|||.:.:||.:|..||||:.||:::
BL00033___ytg 451 IKRHAGYSYRKLFKRFLLMLILTAVMGIILLLVQALLSIFISYEGGQIRS 500
BSNT_04377___ 501 AIVVVIAAAVGGAVYLYCGYRLGFLQKILGRRLPGFLRKGRHAG 544
|:|:.|..||||:||||..||:..|:||.|:||..|.::...
BL00033___ytg 501 AVVIFITTAVGGSVYLYLAYRVKLLEKIFGQRLNRFFKRKAS-- 542
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