Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00003 and BL00078
See
DNA alignment /
Visit
BSNT_00003 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence pep-align/BSNT_00003___yaaA.1.5803.seq
# -bsequence pep-align/BL00078___yaaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00003___yaaA-BL00078___yaaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00003___yaaA-BL00078___yaaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00003___yaaA
# 2: BL00078___yaaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity: 63/71 (88.7%)
# Similarity: 66/71 (93.0%)
# Gaps: 0/71 ( 0.0%)
# Score: 324.0
#
#
#=======================================
BSNT_00003___ 1 MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDEPDNRRG 50
|...::||||||||||||||||||||||||||||||:|||||||||||||
BL00078___yaa 1 MTKTVAIDTEMITLGQFLKLADVIQSGGMAKWFLSEYEVLVNDEPDNRRG 50
BSNT_00003___ 51 RKLYVGDVVEIEGFGSFQVVN 71
|||||||||.||||||||||.
BL00078___yaa 51 RKLYVGDVVTIEGFGSFQVVG 71
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.