Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00005 and BL00080

See DNA alignment / Visit BSNT_00005 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_00005.1.5803.seq
#    -bsequence pep-align/BL00080___yaaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00005-BL00080___yaaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00005-BL00080___yaaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00005
# 2: BL00080___yaaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      61/81 (75.3%)
# Similarity:    69/81 (85.2%)
# Gaps:           1/81 ( 1.2%)
# Score: 297.0
# 
#
#=======================================

BSNT_00005         1 MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPK     50
                     ||||||||||||||:||.|||:||..||||||||.|||.::|.| |.|||
BL00080___yaa      1 MYIHLGDDFVVSTREIVAIFDYKAKTSPIVEEFLSKQKQRIVSS-NSTPK     49

BSNT_00005        51 SIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS     81
                     |||||:|:||:|||:|.|||||||...||||
BL00080___yaa     50 SIVVTLQSIYFSPLASGTLKKRAQSKPEIDS     80


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