Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00006 and BL00081
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence pep-align/BSNT_00006___gyrB.1.5803.seq
# -bsequence pep-align/BL00081___gyrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00006___gyrB-BL00081___gyrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00006___gyrB-BL00081___gyrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00006___gyrB
# 2: BL00081___gyrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 577/640 (90.2%)
# Similarity: 612/640 (95.6%)
# Gaps: 3/640 ( 0.5%)
# Score: 3011.0
#
#
#=======================================
BSNT_00006___ 1 --MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDN 48
|| |||:||||||||||||||||||||||||||:.|||||||||||||
BL00081___gyr 1 MAME-QQNNYDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDN 49
BSNT_00006___ 49 SIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMT 98
|||||||||||:||:.|||||||||.||||||||||||||||||||||||
BL00081___gyr 50 SIDEALAGYCTEINVAIEKDNSITVKDNGRGIPVGIHEKMGRPAVEVIMT 99
BSNT_00006___ 99 VLHAGGKFDGSGYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYK 148
||||||||||||||||||||||||||||||||||||||:||||||.|.::
BL00081___gyr 100 VLHAGGKFDGSGYKVSGGLHGVGASVVNALSTELDVTVYRDGKIHYQEFE 149
BSNT_00006___ 149 RGVPVTDLEIIGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAF 198
||||..||::||:|:.|||||||.||||||:||||||||.||.|||||||
BL00081___gyr 150 RGVPKADLKVIGDTEVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAF 199
BSNT_00006___ 199 LTKGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIE 248
|||||.|||||||||:||||||.||||||||||:||||:||:||||:|||
BL00081___gyr 200 LTKGVKITIEDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIE 249
BSNT_00006___ 249 GEKDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVIN 298
|.|||||||||||||||||||||||.|||:||||||||||||||||||||
BL00081___gyr 250 GSKDGITVEVALQYNDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVIN 299
BSNT_00006___ 299 DYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSE 348
||||:.|:.||:||||||:|||||||||||||||||||||||||||||||
BL00081___gyr 300 DYARRNGVFKESDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSE 349
BSNT_00006___ 349 ARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRR 398
||||||.|||.|:|.|:|||||:|||||:||:||||||||||||||||||
BL00081___gyr 350 ARTITDALFSEALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRR 399
BSNT_00006___ 399 KSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQAIL 448
|||||:|||||||||||||||:||||||||||||||||||||||||||||
BL00081___gyr 400 KSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQGRDRHFQAIL 449
BSNT_00006___ 449 PLRGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKVVI 498
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00081___gyr 450 PLRGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKVVI 499
BSNT_00006___ 499 MTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEY 548
||||||||||||||||||||||||||||.|||||||||||||||||||||
BL00081___gyr 500 MTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKVQQGKRVEY 549
BSNT_00006___ 549 AYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQ 598
||||::|||:||.|||.||||||||||||||||||||||||||.:|||||
BL00081___gyr 550 AYNDQQLEEILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPETRTLLQ 599
BSNT_00006___ 599 VTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI 638
|||:||:||||||||||||||||||||||.||||||||||
BL00081___gyr 600 VTLKDAIDADETFEMLMGDKVEPRRNFIEENARYVKNLDI 639
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