Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00378 and BL00185

See DNA alignment / Visit BSNT_00378 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00378___glpT.1.5803.seq
#    -bsequence pep-align/BL00185___glpT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00378___glpT-BL00185___glpT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00378___glpT-BL00185___glpT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00378___glpT
# 2: BL00185___glpT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity:     283/454 (62.3%)
# Similarity:   357/454 (78.6%)
# Gaps:          13/454 ( 2.9%)
# Score: 1570.0
# 
#
#=======================================

BSNT_00378___      1 MLNIFKPAPHIERLDDSKMDAAYKRLRLQVFIGIFIGYAGYYLLRKNFAF     50
                     ||.:|||||.||||.:.::|:.||:.|||||:|||||||.|||:||||:.
BL00185___glp      1 MLKLFKPAPPIERLPEDQIDSEYKKFRLQVFLGIFIGYAAYYLIRKNFSL     50

BSNT_00378___     51 AIPYLQEQGFSKTELGLVLAAVSIAYGFSKFIMGMVSDRCNPRYFLATGL    100
                     |:|||.|:||||:.||..|:|:||:||.|||:|..:|||.|||.||..||
BL00185___glp     51 AMPYLIEEGFSKSALGFALSALSISYGLSKFVMATISDRSNPRMFLPAGL    100

BSNT_00378___    101 FLSAIVNILFVSMPWVTSSVTIMFIFMFINGWFQGMGWPPCGRTMAHWFS    150
                     .|||::::|...:|:.|||:.||||.:|:|||||||||||.||.:.||||
BL00185___glp    101 ILSAVISLLMGFVPFFTSSIAIMFIMLFLNGWFQGMGWPPSGRVLVHWFS    150

BSNT_00378___    151 ISERGTKMSIWNVAHNIGGGILAPLVTLGIAMF--VT-----WKSVFFFP    193
                     :||||.|.:|||||||:|||::||:...|:|:|  :|     ::.||..|
BL00185___glp    151 VSERGNKTAIWNVAHNVGGGLMAPIAVAGVAIFSGITGSATGYEGVFILP    200

BSNT_00378___    194 AIIAIIISFLIVLLVRDTPQSCGLPPIEEYRNDYPKHAFKNQEKELTTKE    243
                     |::||.::.:...|:||||||.||||||||||||...:.|..||||:|||
BL00185___glp    201 ALVAIAVAVISYWLIRDTPQSVGLPPIEEYRNDYSSKSKKTFEKELSTKE    250

BSNT_00378___    244 ILFQYVLNNKFLWYIAFANVFVYFVRYGVVDWAPTYLTEAKGFSPEDSRW    293
                     |||::|||||::|.||.||:|||||||||:|||||||:|.|||....|..
BL00185___glp    251 ILFKHVLNNKWVWAIALANIFVYFVRYGVLDWAPTYLSEEKGFDMSKSSV    300

BSNT_00378___    294 SYFLYEYAGIPGTILCGWISDRFFKSRRAPAGVLFMAG-XIAVLVYWLNP    342
                     :|||||:||||||:|||||||::||.||.|||.:||||  |||||||.||
BL00185___glp    301 AYFLYEWAGIPGTLLCGWISDKWFKGRRGPAGFVFMAGVLIAVLVYWFNP    350

BSNT_00378___    343 AGNPLVDNIALISIGFLIYGPVMLIGLQAIDLAPKKAAGTAAGLTGFFGY    392
                     ||||::|..:||:||||||||||||||||:|..|||||||||||||.|||
BL00185___glp    351 AGNPMIDMASLIAIGFLIYGPVMLIGLQALDFVPKKAAGTAAGLTGLFGY    400

BSNT_00378___    393 IGGSAFANAIMGFVVDRFNWNGGFIMLISSCILAIVFLALTWNTGKRAEH    442
                     :||:..|||:||.:||...||.||.:|.:||.:|.:..|:|||.  |.:.
BL00185___glp    401 LGGTLTANALMGVIVDASGWNAGFTLLTASCAIAALIFAMTWNV--RGQE    448

BSNT_00378___    443 V---    443
                     |   
BL00185___glp    449 VVKH    452


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