Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05167 and BL00268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence pep-align/BSNT_05167___lacR.1.5803.seq
# -bsequence pep-align/BL00268___lacR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05167___lacR-BL00268___lacR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05167___lacR-BL00268___lacR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05167___lacR
# 2: BL00268___lacR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity: 258/332 (77.7%)
# Similarity: 298/332 (89.8%)
# Gaps: 2/332 ( 0.6%)
# Score: 1378.0
#
#
#=======================================
BSNT_05167___ 1 MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKK 50
||||||:|::||:|||||||||||||||||||||||||:|.||.||||||
BL00268___lac 1 MATIKDVAEKAGYSISTVSRVLNNDESLSVPDETREKIFEVAESLNYRKK 50
BSNT_05167___ 51 TVRPLVKHIAFLYWLTDKEELEDVYFKTMRLEVEKLAKAFNVDMTTYKIA 100
|:|.|||:||||||||||||||||||||||||:|||||.|||::.||||:
BL00268___lac 51 TIRTLVKNIAFLYWLTDKEELEDVYFKTMRLEIEKLAKQFNVELATYKIS 100
BSNT_05167___ 101 DGIESIPEHTEGFIAVGTFSDEELAFLRNLTENGVFIDSTPDPDHFDSVR 150
.||::|||:.|||||||:|||:||..||.:|.:||||||||||:||||||
BL00268___lac 101 GGIDAIPENIEGFIAVGSFSDDELIRLRQMTPHGVFIDSTPDPNHFDSVR 150
BSNT_05167___ 151 PDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYM 200
|||.|||||||:.|.||||:.||||||||.||||::||||:||:|||.||
BL00268___lac 151 PDLKQMTRKTVDFLIEKGHEKIGFIGGTYHNPNTDEDEMDVRERTFREYM 200
BSNT_05167___ 201 REKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAV 250
:||.:|:|.:|||.|||||||||.||..|::|||::|||||..|||||||
BL00268___lac 201 KEKGLLEESFIFCRRGFSVENGYHLMDKAVETLGEKLPTAFFTAADPIAV 250
BSNT_05167___ 251 GCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAV 300
||||||||||||||.||||:||||||.|||||||||||||||.||||||:
BL00268___lac 251 GCLQALNEKGIAIPGRVSIISINNISVAKYVSPPLTTFHIDIKELCKNAI 300
BSNT_05167___ 301 QLLLEQVQDKRRTVKTLYVGAELIVRKSMNEG 332
:|||||:..||:.|||||:||||:||||.|
BL00268___lac 301 ELLLEQILQKRKAVKTLYIGAELVVRKSTN-- 330
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