Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04175 and BL00302

See DNA alignment / Visit BSNT_04175 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:15
# Commandline: needle
#    -asequence pep-align/BSNT_04175___rnhC.1.5803.seq
#    -bsequence pep-align/BL00302___rnhC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04175___rnhC-BL00302___rnhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04175___rnhC-BL00302___rnhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04175___rnhC
# 2: BL00302___rnhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     231/316 (73.1%)
# Similarity:   260/316 (82.3%)
# Gaps:           7/316 ( 2.2%)
# Score: 1162.5
# 
#
#=======================================

BSNT_04175___      1 MSHSVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYKSGK     50
                     |||||:||..|.|::|:..|...:|:...|||||||||.|||||||:|||
BL00302___rnh      1 MSHSVLKVPPSVIERMQSHYGPDITSLSVQGAVFQAKPQGCTITAYRSGK     50

BSNT_04175___     51 VLFQGKNAAAESARWGTAEPE----KKKMAKKPADPRYAPPADIAGMSVI     96
                     ||||||||..|:.|| ||:.|    ||..:||.....|.||..|..||||
BL00302___rnh     51 VLFQGKNAEKEAERW-TADAETPAPKKPASKKSIPSVYQPPEGIGSMSVI     99

BSNT_04175___     97 GSDEVGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIAR    146
                     |||||||||||||:||.|.|.||..|||:|||||||||:||||||::|||
BL00302___rnh    100 GSDEVGTGDYFGPITVACVYADKAKLPLLKELGVKDSKNLKDPQIVQIAR    149

BSNT_04175___    147 NLIKTIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGV    196
                     :||||:|||||||:|||||.||||||||||||||||||||.:||:||||.
BL00302___rnh    150 DLIKTVPYSLLVLRNEKYNEMQEKGMSQGKMKALLHNQAIGNLLKKLDGT    199

BSNT_04175___    197 KPEAILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIA    246
                     :||||||||||||.|||.||.|:..||||||||||||||||:||||||||
BL00302___rnh    200 RPEAILIDQFAEPAVYFKHLAGKTAVKERTYFSTKAEGIHLSVAAASIIA    249

BSNT_04175___    247 RYSFLMEMDKLSREAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLH    296
                     ||||||||||||::||:||||||||.||||.||||.|.|..|||.|||||
BL00302___rnh    250 RYSFLMEMDKLSKQAGITLPKGAGPLVDEAGAKLIKKHGEDALRVFTKLH    299

BSNT_04175___    297 FANTQKAQRLADKKRS    312
                     |||||||:|:|.|:  
BL00302___rnh    300 FANTQKAKRIASKR--    313


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