Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04269 and BL00408
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_04269___dnaE.1.5803.seq
# -bsequence pep-align/BL00408___dnaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04269___dnaE-BL00408___dnaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04269___dnaE-BL00408___dnaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04269___dnaE
# 2: BL00408___dnaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 804/1116 (72.0%)
# Similarity: 946/1116 (84.8%)
# Gaps: 3/1116 ( 0.3%)
# Score: 4217.0
#
#
#=======================================
BSNT_04269___ 1 MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQF 50
|.|||||||||||||||||:||:|.::|..|||:::|||||.|||||::|
BL00408___dna 1 MPFVHLQVHSGYSLLNSAASVEDLTAKAKELGYSAMALTDDEVMYGAVEF 50
BSNT_04269___ 51 YKACKARGINPIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSV 100
||:||.|||.|||||||||.||:.|..:||||||||:|.|||||||||||
BL00408___dna 51 YKSCKKRGIKPIIGLTASVLTDEKEQLSYPLVLLAKTNKGYQNLLKISSV 100
BSNT_04269___ 101 LQSKSKGGLKPKWLHSYREGIIAITPGEKGYIETLLEGGLFEQAAQASLE 150
||||||.|:|.|||.||.||:||:|.|...::|.||:.||.|:|..|:|.
BL00408___dna 101 LQSKSKTGIKEKWLKSYHEGLIALTTGGTSHVEALLKEGLIEEAKDAALR 150
BSNT_04269___ 151 FQSIFGKGAFYFSYQPFKGNQVLSEQILKLSEETGIPVTATGDVHYIRKE 200
..||||:|:||.||||:||:.:|||:||:|||.||||:.|||||.||.||
BL00408___dna 151 CLSIFGEGSFYLSYQPYKGDPLLSERILELSEHTGIPIAATGDVRYIEKE 200
BSNT_04269___ 201 DKAAYRCLKAIKAGEKLT-DAPAEDLPDLDLKPLEEMQNIYREHPEALQA 249
|.|||.|||||||||||. |..||....|:|||..||.:|||:.|:||:.
BL00408___dna 201 DAAAYTCLKAIKAGEKLNEDMKAEGDLHLELKPPAEMLDIYRDRPDALEN 250
BSNT_04269___ 250 SVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGKPD 299
:|:||::|:||:||||||||.:|.|.|.:|||||.::|..||:.||....
BL00408___dna 251 TVKIADRCQVDLSLGQTRLPKYPAPSGKNADDYLAELCFLGLKKRFEAAP 300
BSNT_04269___ 300 ERYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGS 349
:.|:.||:|||.||:.|.|||||||||||||.||:.||:|||||||||||
BL00408___dna 301 KEYVERLKYELKVIRDMAFSDYFLIVWDFMKFAHDNGIITGPGRGSAAGS 350
BSNT_04269___ 350 LVAYVLYITDVDPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQYV 399
||||.|:||||||:||.|||||||||||:|||||||||||||||||||||
BL00408___dna 351 LVAYTLFITDVDPLKHKLLFERFLNPERISMPDIDIDFPDTRRDEVIQYV 400
BSNT_04269___ 400 QQKYGAMHVAQIITFGTLAAKAALRDVGRVFGVSPKEADQLAKLIPSRPG 449
:.||||:|||||.|||||||||||||||||.|:||||||||||||||:||
BL00408___dna 401 KNKYGALHVAQITTFGTLAAKAALRDVGRVMGISPKEADQLAKLIPSKPG 450
BSNT_04269___ 450 MTLDEARQQSPQLDKRLRESSLLQQVYSIARKIEGLPRHASTHAAGVVLS 499
:||.|||..||:|||||..|..||.::..|:||||||||.|.||||||||
BL00408___dna 451 VTLKEARALSPELDKRLNGSKKLQDIFKTAQKIEGLPRHTSIHAAGVVLS 500
BSNT_04269___ 500 EEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLRNLTLIESIT 549
|||||:::|:||||.|:|||||:|.:|||||||||||||||||||||||.
BL00408___dna 501 EEPLTNIIPVQEGHGGVYLTQYSMGYLEDLGLLKMDFLGLRNLTLIESIK 550
BSNT_04269___ 550 SMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRL 599
::|||.|.:.||.|:|.|.|::||.||::|||||||||||||||:|||||
BL00408___dna 551 TLIEKSERVTIDFSAIPYDDEQTFKLLAEGDTTGIFQLESAGMRNVLKRL 600
BSNT_04269___ 600 KPSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDT 649
|||.|||||||||||||||||||||:|:|||||.||.||||||..||:||
BL00408___dna 601 KPSSLEDIVAVNALYRPGPMENIPLYIERKHGRVPVSYPHEDLADILKDT 650
BSNT_04269___ 650 YGVIVYQEQIMMIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEG 699
||||||||||||||||||||.|||||||||||.||.|||||.||:||:.|
BL00408___dna 651 YGVIVYQEQIMMIASRMAGFRLGEADLLRRAVGKKNKEILDTERNHFISG 700
BSNT_04269___ 700 CLKKEYSVDTANEVYDLIVKFANYGFNRSHAVAYSMIGCQLAYLKAHYPL 749
||||.|||..||||||||||||||||||||||||||||.|||||||||||
BL00408___dna 701 CLKKGYSVQAANEVYDLIVKFANYGFNRSHAVAYSMIGYQLAYLKAHYPL 750
BSNT_04269___ 750 YFMCGLLTSVIGNEDKISQYLYEAKGSGIRILPPSVNKSSFPFTVENGSV 799
|||||||||.||||:|::||:|||||.|:.:|.||:|||.:||.||||::
BL00408___dna 751 YFMCGLLTSAIGNEEKLAQYIYEAKGKGLNVLGPSINKSGYPFVVENGAL 800
BSNT_04269___ 800 RYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKSVNRKMLEAL 849
||||||:|.||::|||:||:|||||||.||||||.|...||||||.:|||
BL00408___dna 801 RYSLRAVKGVGIAAVKEIYRARKEKPFADLFDFCVRTSVKSVNRKTIEAL 850
BSNT_04269___ 850 IFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPK 899
||:|||||||:||||||||:|||||||||||.|:||:|.||||..:||||
BL00408___dna 851 IFAGAMDEFGENRATLLASVDVALEHAELFAGDNDQLGFFLDEGLTIKPK 900
BSNT_04269___ 900 YVETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQRA 949
|.||||:|||||||.||||||||||:||||..||:|...||:.|:|...:
BL00408___dna 901 YAETEEMPLVDLLAHEKETLGIYFSDHPLSVHRKKLDRAGALPIIQLLAS 950
BSNT_04269___ 950 VKRQLSLGVLLSKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLS 999
.:::.:||.||:::|||||||||.||||.||||:||||||||||||||||
BL00408___dna 951 GRKKAALGGLLTRMKTIRTKTGQTMAFLELSDESGEMEAVVFPEQFRQLS 1000
BSNT_04269___ 1000 PVLREGALLFTAGKCEVRQDKIQFIMSRAELLENMDAEKAPSVYIKIESS 1049
|:|.||..||..|:.|.|.:|.|.|:|.|.|:|::.|:|.||||||:|.|
BL00408___dna 1001 PILEEGVSLFAEGRLETRNEKRQLIISGASLVESLHAKKQPSVYIKVEES 1050
BSNT_04269___ 1050 QHSQEILAKIKRILLEHKGETGVYLYYERQKQTIKLPESFHINADHQVLY 1099
||:.:|..||..|||||||||.|.:|||::|||::||||::|.|||..||
BL00408___dna 1051 QHTHDIFKKISSILLEHKGETPVCVYYEKRKQTMQLPESYNIKADHAALY 1100
BSNT_04269___ 1100 RLKELLGQKNVVLKQW 1115
|||.::|:|||||:
BL00408___dna 1101 RLKSVVGEKNVVLR-- 1114
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