Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00104 and BL00507

See DNA alignment / Visit BSNT_00104 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_00104___yabR.1.5803.seq
#    -bsequence pep-align/BL00507___yabR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00104___yabR-BL00507___yabR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00104___yabR-BL00507___yabR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00104___yabR
# 2: BL00507___yabR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:     123/132 (93.2%)
# Similarity:   126/132 (95.5%)
# Gaps:           4/132 ( 3.0%)
# Score: 616.5
# 
#
#=======================================

BSNT_00104___      1 MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHL     50
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
BL00507___yab      1 MSIEVGSKLQGKVTGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHL     50

BSNT_00104___     51 KVGDQVEVKVINVEKDGKIGLSIKKAKDRPQ----ARPRNDFRPKESFEQ     96
                     ||||||||||||||||||||||||||.||||    |||:||||.||:|||
BL00507___yab     51 KVGDQVEVKVINVEKDGKIGLSIKKAVDRPQSSRPARPKNDFRSKETFEQ    100

BSNT_00104___     97 KMNKFLKDSEDRLSSLKRNTESKRGGRGARRG    128
                     ||||||||||||||||||||||||||||||||
BL00507___yab    101 KMNKFLKDSEDRLSSLKRNTESKRGGRGARRG    132


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