Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00070 and BL00535

See DNA alignment / Visit BSNT_00070 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00070___yabC.1.5803.seq
#    -bsequence pep-align/BL00535___yabC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00070___yabC-BL00535___yabC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00070___yabC-BL00535___yabC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: BL00535___yabC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     222/293 (75.8%)
# Similarity:   259/293 (88.4%)
# Gaps:           2/293 ( 0.7%)
# Score: 1202.0
# 
#
#=======================================

BSNT_00070___      1 -MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDT     49
                      ::.||.||:.|||||:||||||||||||||||||:..||..|.||||||
BL00535___yab      1 MIINRQKSFDQKSDMGMLYLVPTPIGNLEDMTFRAVSVLKEADIIAAEDT     50

BSNT_00070___     50 RQTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLP     99
                     ||||||||||||||.||||||||||||||||:||||.|||:|||||||:|
BL00535___yab     51 RQTKKLCHVYEIETQLVSYHEHNKESSGHKILEWLKEGKNVALVSDAGMP    100

BSNT_00070___    100 TISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQPFFFYGFLN    149
                     ||||||||||:||.::||||||||||||||||||||||.||||||:|||:
BL00535___yab    101 TISDPGAEIVRDFIEMGGYVVPLPGANAALTALIASGIAPQPFFFFGFLD    150

BSNT_00070___    150 RQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGDREIAVTRE    199
                     |.|:|:||:|||||.||||:||||:||||||||:|:.|:.|:|:||:|||
BL00535___yab    151 RSKRERKKQLEALKNRQETMIFYESPHRLKETLAAIREVFGNRQIALTRE    200

BSNT_00070___    200 LTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWET    249
                     ||||:||||||:|.|.:.|:.::|:|||||||:||| .||..||..|||.
BL00535___yab    201 LTKKFEEFIRGSIEEALTWSEQEQVRGEFCLVIEGS-REETIEEAVWWEH    249

BSNT_00070___    250 LTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ    292
                     |:.|||||||||:|..|||||||.||||.||||::||||||:.
BL00535___yab    250 LSEKEHVEHYISEGYPSKEAIKKTAVDRGVPKRKIYDAYHIQN    292


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