Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04085 and BL00629
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_04085___spoVID.1.5803.seq
# -bsequence pep-align/BL00629___spoVID.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04085___spoVID-BL00629___spoVID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04085___spoVID-BL00629___spoVID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04085___spoVID
# 2: BL00629___spoVID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity: 254/580 (43.8%)
# Similarity: 321/580 (55.3%)
# Gaps: 130/580 (22.4%)
# Score: 1063.0
#
#
#=======================================
BSNT_04085___ 1 MPQNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIIGSL 50
||||:||||||||||||||||||||||||||||||.||||||||||.|||
BL00629___spo 1 MPQNNRLQFSVEESICFQKGQEVSELLSISLDPDITVQEVNDYVSIRGSL 50
BSNT_04085___ 51 ELTGEYNIDQNKHTEEIYTDKRFVEQVRKREDGSAELTHCFPVDITIPKN 100
||||||||||.:...|:....||||.|:.:.||||||||||||||||||:
BL00629___spo 51 ELTGEYNIDQTREYAELPATSRFVEDVKLKGDGSAELTHCFPVDITIPKD 100
BSNT_04085___ 101 KVSHLQDVFVFIDAFDYQLTDSRILTIQADLAIEGLLD---DTQDKEPEI 147
||:||.|||||||||||||||:|:|||||||||||||: :..::||.
BL00629___spo 101 KVNHLNDVFVFIDAFDYQLTDARMLTIQADLAIEGLLNVSGEAGEEEPR- 149
BSNT_04085___ 148 PLYEAPAAFREEELSEPSAHSVVEEPGASSAEEAVLQHEPPAEPPELFIS 197
..|||...||..||:..|...:......:|.::|.:.|.|
BL00629___spo 150 ---TMPAAVHPEEELEPAYRSPSNDEDQGEEKEYLIQLDRPYE------- 189
BSNT_04085___ 198 KAGLREELETEKAESEPPESVASEPEAREDVKEEEESEELAVPETEVRAE 247
|..|:..||.::.|..||..:....
BL00629___spo 190 -------------------------EQDEEQAEEHDTGEETVPIYQSFLG 214
BSNT_04085___ 248 SETEESEPEPDPSEIEIQEIVKAKKETAEPAAAIADVREEADSPAETELR 297
::|||::| ..||..:||....||
BL00629___spo 215 NDTEEAKP----------------FFTASLSAAERTKRE----------- 237
BSNT_04085___ 298 EHAGAEESPALEAELHSETVIAEEKEETTESPNHEYALRQEAQNEEAAQS 347
|..:||.:.|.|..||.|::|...||
BL00629___spo 238 --------------------IENQKEASLEQPEEEYKLKREKVEEE---- 263
BSNT_04085___ 348 DQADPALCQEEAEADEALESVSEAALSIEDSRETASAVYVENDKADFHFH 397
.||.|... |.|.|.....|..||.|
BL00629___spo 264 --------PEEYELKR--EKVEEEPEEYELKREEA--------------- 288
BSNT_04085___ 398 QKTSSEEASQEELPEPAYRTFLPEQE-EEDSFYSAPKLLEEE--EQEEES 444
||.||.::.::.|.:| :|:.|||.|.||:|: ::|.|:
BL00629___spo 289 ----------EEEPELSHSSYQPHEELKENPFYSVPPLLKEDQNDREPEA 328
BSNT_04085___ 445 FEIEVRKTPSAEEPKEETPFQSFQLPESSETERKETDAVPRVAPAAETKE 494
||:||.:...|.:.:||.. .:.::||.|..|:.|.:.......||:.:|
BL00629___spo 329 FEVEVTQEAEAIDEEEEAG-HTIEIPEYSFHEQTEPEEERDEMQAADEQE 377
BSNT_04085___ 495 PQTKESDNSLYLTKLFTKEA-DEFSRMKICIVQQEDTIERLCERYEITSQ 543
...||:||:|||||||||:. :||:||::|||||.|||:.|||||:|..|
BL00629___spo 378 VSAKENDNALYLTKLFTKQGEEEFTRMRMCIVQQNDTIDLLCERYDINVQ 427
BSNT_04085___ 544 QLIRMNSLALDDELKAGQILYIPQYKNSHA 573
||||||||:||:|||.|||||||.|:||||
BL00629___spo 428 QLIRMNSLSLDEELKEGQILYIPDYQNSHA 457
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