Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04990 and BL00699

See DNA alignment / Visit BSNT_04990 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:10
# Commandline: needle
#    -asequence pep-align/BSNT_04990___yvgS.1.5803.seq
#    -bsequence pep-align/BL00699___yvgS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04990___yvgS-BL00699___yvgS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04990___yvgS-BL00699___yvgS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04990___yvgS
# 2: BL00699___yvgS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     436/777 (56.1%)
# Similarity:   586/777 (75.4%)
# Gaps:           4/777 ( 0.5%)
# Score: 2290.0
# 
#
#=======================================

BSNT_04990___      1 MNQQDKEWKEEQSRIDEVLQELEKKERFLETSAGGLKHDIIGLRKSFWED     50
                     |.:..:||.||:.||..||:||::|...|:...||||.|||.|||.||.|
BL00699___yvg      1 MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSD     50

BSNT_04990___     51 VKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPY    100
                     |.||..|.:||:||..|||||||:|::||.:|::...|||.:.::|:|||
BL00699___yvg     51 VTVNIADENEAVETFFSIKQQAEVLAERERSHKQFYSQLKNLLKVKESPY    100

BSNT_04990___    101 FGRIDFIENGEEQAERIYIGLASCLDEKEEHFLIYDWRAPISSLYYNYSP    150
                     |||:||:|:|||.||.:||||||.:.||||.|||||||||||||:|||.|
BL00699___yvg    101 FGRVDFLEDGEENAESVYIGLASLMYEKEERFLIYDWRAPISSLFYNYGP    150

BSNT_04990___    151 GKAEYEVPGETIEGEMVLKRQFMIKNGTLKAMFNTDMTIGDEMLQEVLSH    200
                     |.|:||||.||:.|.:.|||||:.|||.|||||||||.||||:|||||..
BL00699___yvg    151 GAAQYEVPDETVRGTIELKRQFLFKNGQLKAMFNTDMAIGDEVLQEVLGQ    200

BSNT_04990___    201 HSDTQMKNIVSTIQKEQNQIIRNEKSKILIVQGAAGSGKTSAALQRVAYL    250
                     .:|.|||:||:|||||||||||||||:.|||:||||||||||||||.|||
BL00699___yvg    201 QADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKTSAALQRAAYL    250

BSNT_04990___    251 LYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR    300
                     |||.||.|::.|::|||||.||||||::|||||||||::|.||||::..|
BL00699___yvg    251 LYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARR    300

BSNT_04990___    301 LGRRFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVT    350
                     ||::..||:||||||||||.:.|.:...|:..|..|:.|:|:..|::||.
BL00699___yvg    301 LGKQVPCETPFDQLEYCLTASDGEEQRIRMKSIELKSSLAFKGIIDDYVK    350

BSNT_04990___    351 RLSSDGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLL    400
                     .|:...::||:|.|||:::||..|::.:|.:||.:.::.||:|||.||||
BL00699___yvg    351 YLAKGHLVFKHITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLL    400

BSNT_04990___    401 SELNKLEKKERRKDWVVHEAELLDKEDYLDVCKKLQERKRFSESTFNDYQ    450
                     ..|||.|::||:||||:.|:||||||:||...|:|||.:||:|:||:||:
BL00699___yvg    401 QLLNKYERQERKKDWVIEESELLDKEEYLKAYKRLQEEQRFTENTFDDYE    450

BSNT_04990___    451 REQQLLAAIIVKKAFKPLKQAVRLLAFLDVTQLYLQLFSG-WGGKFQHEK    499
                     ||:.|||:|:.::.||||||.|:...|:|....||||||| :..:.:.:.
BL00699___yvg    451 RERNLLASIVAEREFKPLKQVVKAFGFIDFKGTYLQLFSGRYTPQTRPDD    500

BSNT_04990___    500 MAAIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKIKHLFIDEAQ    549
                     ..:|...|:.:|...|||||||.|||||::.::|..|||.|:||||||||
BL00699___yvg    501 WQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTAIRHLFIDEAQ    550

BSNT_04990___    550 DYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTIHGDQRMD-ACFEDDPA    598
                     ||:|||:|::.|:|||.|:|:|||:||:|.||..|....:. ..||.:..
BL00699___yvg    551 DYTPFQLAFLESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKT    600

BSNT_04990___    599 EYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMP-LVVKTEGHES    647
                     |.:.|||:||||::|||.||.:::.|.:||.|||:|:.| |.:..:.| :
BL00699___yvg    601 EIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPTLTISADPH-A    649

BSNT_04990___    648 LCQKLAQEIGRLKKKGHETIAVICKTAQQCIQAHAHMSEYTDVRLIHKEN    697
                     ..:::|..:..|:|:|.|||||||||.::|..|..|:.::.:::||.||.
BL00699___yvg    650 HHKEMASLMTALQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKET    699

BSNT_04990___    698 QPFQKGVCVIPVYLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAM    747
                     :.|||||.|||||||||||||||::|||||:.|..|.:|.|.||||||||
BL00699___yvg    700 RTFQKGVVVIPVYLAKGIEFDAVIIYDASEKQYKKERERTLFYTACTRAM    749

BSNT_04990___    748 HMLAVFYTGEASPFVTAVPPHLYQMAE    774
                     |.|.:|..|:.:.|:..||..:|...|
BL00699___yvg    750 HELHLFSIGKETHFLNGVPNDMYTRRE    776


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04990 and BL00699

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
