Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00129 and BL00858
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_00129___pabB.1.5803.seq
# -bsequence pep-align/BL00858___pabB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00129___pabB-BL00858___pabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00129___pabB-BL00858___pabB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: BL00858___pabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 349/507 (68.8%)
# Similarity: 399/507 (78.7%)
# Gaps: 40/507 ( 7.9%)
# Score: 1825.0
#
#
#=======================================
BSNT_00129___ 1 MEEKFTFFTHNIALQLKTSKKENRGMIQMAQRRPAGKKVPFQKDSFLQQF 50
|.||||..:..||....||||:
BL00858___pab 1 ----------------------------MRQRRPVARAFPFSNQQFLQQY 22
BSNT_00129___ 51 EKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFK 100
|.|::.:::||||||||||.||||||||:|..|||||||||::..:::||
BL00858___pab 23 ESLSKGKEYHVLLESARGGEYSIAGLDPVAIAKGKDGITTIQYKGDVIFK 72
BSNT_00129___ 101 EGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSL 150
||||...|..||:||:|||..:||||||||:||||||||||||.||:||:
BL00858___pab 73 EGDPFLQFSQWFETLKTETVADFPDFQGGAVGFLSYDYARYIEKFKILSI 122
BSNT_00129___ 151 DDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQET---ADVKLSEL 197
|||:|||::||||||||||||:::.||:||| :|:|| |:.||..|
BL00858___pab 123 DDLQTPDLFFLVFDDIAVYDHEQQQLWVITH---TDEETPAAAEEKLDRL 169
BSNT_00129___ 198 EQMWLTELP-AVSLREMNPETDGSFAAPFTEDGFSQAVEKIKQYIASGDV 246
||||.||.| |....:.|.....:|||.|||.||||||||:|||||||||
BL00858___pab 170 EQMWKTEHPKAAGGHQPNDNKGPAFAASFTEAGFSQAVEKVKQYIASGDV 219
BSNT_00129___ 247 FQVNLSIRQSQSLSAHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPEL 296
||||||:|||:.|||.||::||.|||:|||||||||||||||||||||||
BL00858___pab 220 FQVNLSVRQSERLSAPPYEVYKMLREINPSPYMAYLETPDFQIICGSPEL 269
BSNT_00129___ 297 LVSKKGKLLETRPIAGTRSRGKTNEEDEVLANELIHNEKERAEHVMLVDL 346
|:.|||..|||||||||||||....|||.||||||.||||||||||||||
BL00858___pab 270 LIKKKGTRLETRPIAGTRSRGADEAEDEALANELIMNEKERAEHVMLVDL 319
BSNT_00129___ 347 ERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIH 396
|||||||||:||||||:|||.||||||||||||||.|||:|..||||:||
BL00858___pab 320 ERNDLGRVSKYGSVRVDEFMVIEKYSHVMHIVSNVCGELRDECDAVDVIH 369
BSNT_00129___ 397 AVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVI 446
|||||||||||||||||||||||||||||||||||||||||.|:.|||||
BL00858___pab 370 AVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNQDMHFNIVI 419
BSNT_00129___ 447 RTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSKEETK 496
||||...||||||||||:||||.|:||||||.|||.||::||:||:||.|
BL00858___pab 420 RTIYVKAGQAFMQSGAGIVIDSNPRHEYKESIKKALAMKKALQLSEEEKK 469
BSNT_00129___ 497 IR----- 498
.:
BL00858___pab 470 EQRRAEI 476
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