Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00353 and BL00918
See
DNA alignment /
Visit
BSNT_00353 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence pep-align/BSNT_00353___ndhF.1.5803.seq
# -bsequence pep-align/BL00918___ndhF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00353___ndhF-BL00918___ndhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00353___ndhF-BL00918___ndhF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00353___ndhF
# 2: BL00918___ndhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity: 273/516 (52.9%)
# Similarity: 350/516 (67.8%)
# Gaps: 17/516 ( 3.3%)
# Score: 1364.0
#
#
#=======================================
BSNT_00353___ 1 ---MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGILAL 47
||.|| ..|.:||..|.....|.||.|:.:|||::||||..|:||
BL00918___ndh 1 MFDMLDSL---FWLKIFFASLALCLFSALLVLNRKVPLAYVRIHAKIIAL 47
BSNT_00353___ 48 PLLVSL--LILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRY 95
|.|.:| ||.||.|.: ...|.|||||.|:..|||.||||:||:||||
BL00918___ndh 48 PPLAALAALITANPGQA--EASWRLDSLAWLIALFVLTIGFIVQRYSVRY 95
BSNT_00353___ 96 LMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRL 145
|.|||||||:|.|.|.|||.||..||:.|||.::|.||.||:|||.||.|
BL00918___ndh 96 LFGDRSYRKFFVLLTLTTGGASCAWLNDDLRWLLLCWGITLLGLTALIGL 145
BSNT_00353___ 146 NSAWQVASEAAKISGRLFLLSWFSLFFAMTWLFHATGQWQLSLVVTNESL 195
|||||.|..||..:||:|.|||.::..|..||..:||.|:||..:..|||
BL00918___ndh 146 NSAWQAAKNAALYAGRIFALSWLAIAAAALWLSLSTGHWRLSSAIAEESL 195
BSNT_00353___ 196 AGLGEWGRTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGL 245
..|..|.:|||.||::|.|:||||||||.|||::|.:|||||||:|||||
BL00918___ndh 196 VQLSSWEKTGIGLLVILTVMIPAAQWPFHRWLLDSAIAPTPVSAVMHAGL 245
BSNT_00353___ 246 VNAGGIILTRFSPLFHGGIASIILLLLASISVLIGTGISLVQVDYKRQLV 295
||.||::||||:|:|.|.:..:|||:.|.:|||:|||:.:||.||||||.
BL00918___ndh 246 VNVGGVMLTRFAPMFSGDVLQLILLVPAVLSVLLGTGMMIVQTDYKRQLA 295
BSNT_00353___ 296 GSTIGQMGFMLIQCALGAYIAAIIHLILHGLFKATLFLQAGSAVGRHEVL 345
.||:.||||||:||||||||||:|||||||||||.|||||||||.|:|..
BL00918___ndh 296 ASTVAQMGFMLVQCALGAYIAAVIHLILHGLFKAALFLQAGSAVRRYESF 345
BSNT_00353___ 346 ARTNERTSYLWVMAGRILSLVIGVAFWLAAPGEVYQFISALILGWSLSVS 395
|....|.:..|.|.|.:.:|.:.:..|.:|..:.||.||||:|||:|.::
BL00918___ndh 346 ASKPGRPALFWNMIGGVFALALVIGIWASATDDGYQLISALVLGWALFIA 395
BSNT_00353___ 396 WNQLVAFGEGRIGRIAGLTVLGGAALVYFIIHNLFYKWLHTTIFQSVQPP 445
|.|||....||:.|||||.:|.||:|.:.|||::.:..|...:.|..:||
BL00918___ndh 396 WRQLVTANYGRVTRIAGLFILTGASLAFAIIHSVLHGLLKDAVVQGAEPP 445
BSNT_00353___ 446 MSAVMIVVCLLLFGSALGTWVARYRSSVFFAVLYLWLVRLGEAKPKSVES 495
..|.::...:||.|||.|..:.|.|.: :...|||.||:.||...:|||.
BL00918___ndh 446 AMAAVLTAVVLLAGSAAGALIVRQRFA-WSGALYLRLVKTGEPHFESVEE 494
BSNT_00353___ 496 HPDYLKQYIS------ 505
.|:||.||::
BL00918___ndh 495 RPNYLDQYLTQGGRQS 510
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.