Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01943 and BL01010

See DNA alignment / Visit BSNT_01943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_01943___yjbO.1.5803.seq
#    -bsequence pep-align/BL01010___yjbO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01943___yjbO-BL01010___yjbO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01943___yjbO-BL01010___yjbO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01943___yjbO
# 2: BL01010___yjbO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     195/299 (65.2%)
# Similarity:   241/299 (80.6%)
# Gaps:           8/299 ( 2.7%)
# Score: 1048.0
# 
#
#=======================================

BSNT_01943___      1 MEHFFIRKNITSAEDGMTVKEYAGELGISKRLLTDIKFGGGDLQINGEHV     50
                          :::.||..:.|:.:|||...||||||:|||||||||||.:||.||
BL01010___yjb      1 -----MKQIITEEDSGVLLKEYVQRLGISKRMLTDIKFGGGDLLVNGGHV     45

BSNT_01943___     51 TVKYVLKEGDLLIVKFPEEQVSETLLAEPIPLDILYEDEHVLVINKQPYV    100
                     ||:|||::||.|:::||.|::||:|..|.:||.||:||:||||:||||.:
BL01010___yjb     46 TVRYVLQKGDELVIQFPPEKMSESLQPEEVPLHILFEDDHVLVLNKQPCI     95

BSNT_01943___    101 SSIPSREHPSGSIANGIIDHYQKNGVRATVHLVTRLDRDTSGVMLVAKHR    150
                     ||||||||||||:|||:|.:||:.||.||||||:||||||||||||||||
BL01010___yjb     96 SSIPSREHPSGSLANGLIHYYQRTGVHATVHLVSRLDRDTSGVMLVAKHR    145

BSNT_01943___    151 FAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAPIGRHPDSIIERTV    200
                     ||||:||..||.|.|||:|.|||||.:|:.:||:||||||...|||||.|
BL01010___yjb    146 FAHSLLSGLQKKGAVKRQYRAVVHGLIAEEQGTIDAPIGRKSSSIIERAV    195

BSNT_01943___    201 TPDGQKAVTHFYVTCANDDMTSVALQLETGRTHQIRVHMSYLGHPLCGDT    250
                     .||||||||||:|......||.|:::||||||||||||||::|:||||||
BL01010___yjb    196 IPDGQKAVTHFWVNRRFSGMTDVSIRLETGRTHQIRVHMSHIGYPLCGDT    245

BSNT_01943___    251 LYGGTRQEIGRQALHSEHLSFIHPLTQKNMTFHAPLPQDMRKLIKGENH    299
                     ||||||..|.|||||||.|:|.||.|.:.:||.||:|.|||:||:.   
BL01010___yjb    246 LYGGTRGFINRQALHSERLTFFHPFTMEELTFQAPVPNDMRQLIES---    291


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