Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00890 and BL01085

See DNA alignment / Visit BSNT_00890 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence pep-align/BSNT_00890.1.5803.seq
#    -bsequence pep-align/BL01085___ydeD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00890-BL01085___ydeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00890-BL01085___ydeD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: BL01085___ydeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:      73/318 (23.0%)
# Similarity:   103/318 (32.4%)
# Gaps:         154/318 (48.4%)
# Score: 357.0
# 
#
#=======================================

BSNT_00890         0 --------------------------------------------------      0
                                                                       
BL01085___yde      1 MKSAHVKGVLMVLAGASLWGLSGSAAQFVFERGAADAGSLVSVRLLASGV     50

BSNT_00890         0 --------------------------------------------------      0
                                                                       
BL01085___yde     51 ILLLYVSMKNGFQHVCQIWKKKTDICSILVFSIFGMLAVQYTFFASIEKG    100

BSNT_00890         1 ---------------------------------------------MLTNG      5
                                                                  :||.|
BL01085___yde    101 NAAAAAILQYLAPFFVLFYLYVKKELPPKWKDAVLTLLALSGVFLLLTGG    150

BSNT_00890         6 SISQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIGG     55
                     ....|.:||.|.|||||||.|.||||::|.||:..|.:|.|.||.|::||
BL01085___yde    151 RPDSLYIPAEAAVWGVLSGGALAFYTVFAGGLIQSFGALTVTGWGMLVGG    200

BSNT_00890        56 FALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSPK    105
                     ....|:.||::.:...:.|...|.||||:|.||.:||..:|.||..||.|
BL01085___yde    201 AGFSFLFPPFRFNLSHIGAGEAAAILFVVLCGTALAFALYIGSLSYLSAK    250

BSNT_00890       106 ETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALNKEPS    155
                     |||.|...|||:||:::.:||..||.:||..|.:.:|...:||:|::|  
BL01085___yde    251 ETSCLSCAEPLAAVLSSALWLGVPFNAFQGAGTVMVIITVIILSLSRE--    298

BSNT_00890       156 VQSEKSILKIRNHANRDI    173
                            .|..:..|..:
BL01085___yde    299 -------RKAADSVNERV    309


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.