Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04410 and BL01357

See DNA alignment / Visit BSNT_04410 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_04410___amyC.1.5803.seq
#    -bsequence pep-align/BL01357___amyC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04410___amyC-BL01357___amyC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04410___amyC-BL01357___amyC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04410___amyC
# 2: BL01357___amyC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     204/276 (73.9%)
# Similarity:   231/276 (83.7%)
# Gaps:           0/276 ( 0.0%)
# Score: 1038.0
# 
#
#=======================================

BSNT_04410___      1 MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPAD     50
                     |.....|...:.|||||.:...|.|||||||||:||||||:||||.||.:
BL01357___amy      1 MNRQEKKKRALWTLLAAWITVFHLIPFYILLTTALKAKGDFSSKWKFPDE     50

BSNT_04410___     51 ISFHNFSEAWERASLGNSFINTMIITGFSALLLIIFGSLAAYPLARRETK    100
                     ||..||:|||::|.|..||.||.:||..||.|||:.|||||||||||.||
BL01357___amy     51 ISLGNFAEAWDKAGLAGSFFNTAVITFASAALLIVIGSLAAYPLARRRTK    100

BSNT_04410___    101 LNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMP    150
                     ||:||:.|.|.||||||||||||||:|||:.||:||..|||..|||||||
BL01357___amy    101 LNQAVYFLFIGIMIIPPLTSMVPLYKMVVELGMLNTLEIAILNNTAAYMP    150

BSNT_04410___    151 LTVFLYSGFIRSTIPKELEEAARIDGAGMLKIFFTIVFPLLKPITATICI    200
                     ||:|||:||||||||||||||||||||....|||.||||||||:||||||
BL01357___amy    151 LTIFLYAGFIRSTIPKELEEAARIDGASTAGIFFRIVFPLLKPVTATICI    200

BSNT_04410___    201 ISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNLHLVAAAALMA    250
                     |:||||||||||:||||||:.|||||||:|||||:|||||||||||:|||
BL01357___amy    201 IACVFIWNDYQFSIFFLQDKSVQTLTVAIAGFFGQNANNLHLVAAASLMA    250

BSNT_04410___    251 MLPMVVLFLALQKYFIAGLSSGAVKG    276
                     ||||.:|||.||||||.|||:||:||
BL01357___amy    251 MLPMTILFLFLQKYFIKGLSAGALKG    276


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