Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04407 and BL01359
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence pep-align/BSNT_04407___msmE.1.5803.seq
# -bsequence pep-align/BL01359___msmE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04407___msmE-BL01359___msmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04407___msmE-BL01359___msmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04407___msmE
# 2: BL01359___msmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 239/428 (55.8%)
# Similarity: 322/428 (75.2%)
# Gaps: 13/428 ( 3.0%)
# Score: 1349.5
#
#
#=======================================
BSNT_04407___ 1 MKHTFVLFLSLILL--VLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTF 48
||.....|:.||:| :|.|||. |::..:...|||::|||:.|||::|.
BL01359___msm 1 MKKIIFSFVLLIILSAILAGCSG-KNAGKSGDVTLTMFSTMTNDSEKNTL 49
BSNT_04407___ 49 RKLAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKI 98
|.:|..||||:..|.:.:.|||.|||||:||:|||||:|||||||||.||
BL01359___msm 50 RSIADDFEKENEGIKIDISFPGPDYENMLRVKMAANDMPDLFDTHGWAKI 99
BSNT_04407___ 99 RYGEYTADLRDMEWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRN 148
|||||||||:||:|.:.|||||:.|||::.|||||||.||||||:.||..
BL01359___msm 100 RYGEYTADLKDMDWVKHLDPNLDPILKDEKGKVYAYPFNQAKDGIVYNAG 149
BSNT_04407___ 149 ILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQ 198
:|.:||:.||:|:|:.:.||.||||||.||::||||||.||.:.||:|||
BL01359___msm 150 LLKKYGLKPPQTLDELMHALETIKEKSNGSVIPFWFAGSDKGALAQFYDQ 199
BSNT_04407___ 199 FATPLLITDPAHNEKKQLINGTFQWNKFTCLSKILKQMQKEKLINIDAVT 248
.||||||||...||||.|.||||.|:.:|.|::..|:||:::|||.|.:|
BL01359___msm 200 LATPLLITDDRRNEKKALENGTFDWSDYTLLAETFKEMQEKQLINKDILT 249
BSNT_04407___ 249 AKKSQLIELMAQNKIAFTMQGGTLGQDVAQINSNVEVGIIPTPAIHPGDD 298
||.|||:|||||.||.||:...::|.|..::|.::::|::||||::.||.
BL01359___msm 250 AKPSQLVELMAQEKIGFTLSVTSIGPDTREVNPDIQLGVMPTPAVYEGDK 299
BSNT_04407___ 299 PIWIGGERYTLAAWKDSSQLKEAKEFIAFMARPANAKQMAEATSLPSGLT 348
|.||||||:|:|.||||..|:|||.||.|.|:|...|::|||||.|..||
BL01359___msm 300 PSWIGGERHTVAVWKDSEHLEEAKRFIEFAAQPKYVKKIAEATSFPQALT 349
BSNT_04407___ 349 NVKADIFYANDYEHYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILA 398
|.:|:.:|:..|:.|:::|:||||||:|||:|||||:||.||||.|..|.
BL01359___msm 350 NTEAENYYSKFYDQYEEIKIEPYFDRVYLPSGMWDVMGTTGQELLAGTLT 399
BSNT_04407___ 399 PQDISQKLGREYKRLREQSETQGAENNE 426
|:.:|:|:.:||.||:||
BL01359___msm 400 PKQVSEKMKQEYSRLQEQ---------- 417
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