Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03588 and BL01498
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence pep-align/BSNT_03588___bkdR.1.5803.seq
# -bsequence pep-align/BL01498___bkdR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03588___bkdR-BL01498___bkdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03588___bkdR-BL01498___bkdR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03588___bkdR
# 2: BL01498___bkdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 540/692 (78.0%)
# Similarity: 608/692 (87.9%)
# Gaps: 4/692 ( 0.6%)
# Score: 2725.5
#
#
#=======================================
BSNT_03588___ 1 MQKVLIVGAGKRGTALLHILIKTAIIDIIAVVDKDPEAPGLKEAEQYGIA 50
|||||||||||.|||||.:|:||..:.|.||:||:||||||..|::..|.
BL01498___bkd 1 MQKVLIVGAGKGGTALLDLLLKTKTMHIEAVIDKNPEAPGLFVAQKNDIE 50
BSNT_03588___ 51 VSSDWKPYIQQKPDIVIHTTGDQAVFDELLQRKHEDTIVMPGKMAYIVFQ 100
.:.||.|||.::.||:|.||||..|..:|:::||:.|||:||.:|||:.|
BL01498___bkd 51 TALDWTPYITEQIDIIIETTGDAGVLKQLMRKKHDRTIVVPGSLAYIISQ 100
BSNT_03588___ 101 LMEEKQHLIQMLKEQTYKYDRIFNSTHDGMIFIDINEEIILFNHMAEKMV 150
||.|||.|||||||||||:||||||.:||||||||||||||||.|||.|.
BL01498___bkd 101 LMNEKQQLIQMLKEQTYKHDRIFNSMNDGMIFIDINEEIILFNKMAEVMT 150
BSNT_03588___ 151 GKKREEVIGRPIKEVIPSTKMPRILKTRVPEYNQKQLLGDHLQIVTTRLP 200
|.||.|.||:.|:.|||:||:||||.||.|||:|||.|..:.||||||:|
BL01498___bkd 151 GTKRSEAIGQHIQSVIPTTKLPRILNTREPEYHQKQFLHPNRQIVTTRIP 200
BSNT_03588___ 201 IIDEGGRLLGALCVFKDITDAVELAEEVTNLKQVRTMLEAIIQSSDEAIS 250
|||:||.|||||.:||||||||||||||||||:|||||||||||||||||
BL01498___bkd 201 IIDDGGTLLGALSIFKDITDAVELAEEVTNLKEVRTMLEAIIQSSDEAIS 250
BSNT_03588___ 251 VVDENGIGLLINKAYTKMTGLSEKEVIGKPANTDISEGESMHLKVLETRR 300
||||||.|::||:||||||||::.:|||||||||||||||||||||||||
BL01498___bkd 251 VVDENGNGMMINRAYTKMTGLTKDQVIGKPANTDISEGESMHLKVLETRR 300
BSNT_03588___ 301 PVRGVRMKVGPNEKEVIVNVAPVIVDGILKGSVGVIHDVSEIKMLTAELN 350
||||||||||||:|||||||||:|||||||||||||||||||:.||.|||
BL01498___bkd 301 PVRGVRMKVGPNKKEVIVNVAPIIVDGILKGSVGVIHDVSEIQSLTNELN 350
BSNT_03588___ 351 RARQIIRTLEAKYTFDDIIGKSEQMLVALEQAKLGAKTPATILLRGESGT 400
|||||||||||||||.||||.|||||||||||||||||||||||||||||
BL01498___bkd 351 RARQIIRTLEAKYTFADIIGSSEQMLVALEQAKLGAKTPATILLRGESGT 400
BSNT_03588___ 401 GKELFAHAIHNESDRKYNKFIRVNCAALSENLLESELFGYEDGAFSGAKR 450
||||||||||||||||||||:||||||:||:||||||||||:||||||:|
BL01498___bkd 401 GKELFAHAIHNESDRKYNKFVRVNCAAISESLLESELFGYEEGAFSGARR 450
BSNT_03588___ 451 GGKKGLFEEANNGSIFLDEIGELTQNMQAKLLRVLQEKEIVRVGGTKAIP 500
|||||.|||||||||||||||||:.|.||||||||||||||||||||.||
BL01498___bkd 451 GGKKGFFEEANNGSIFLDEIGELSLNTQAKLLRVLQEKEIVRVGGTKPIP 500
BSNT_03588___ 501 VNVRVIAATNVNIEKAMADGTFREDLYYRINRYPISIPPLRQRLEDIEAL 550
||||||||||||||||:|:|.||||||||||||||||||||||.||||||
BL01498___bkd 501 VNVRVIAATNVNIEKALAEGRFREDLYYRINRYPISIPPLRQRKEDIEAL 550
BSNT_03588___ 551 SVRLIQKINRDYGRNVKGLSQQALRALSAYHWPGNVRELENVLGRAMIFL 600
|..||.|||::||||||||::.||::|.|..||||||||||||.||||||
BL01498___bkd 551 SRHLIGKINQEYGRNVKGLTKNALKSLKARKWPGNVRELENVLERAMIFL 600
BSNT_03588___ 601 NPHMEWIEKDHLPVFELEQKENDTDQGTGFNFPDIEGEKLSVAVEKFEAH 650
.|.||||:.:|||..:..:|:.: .|..||:||.||||.|||:||||
BL01498___bkd 601 KPQMEWIDLEHLPEADRPRKKVE----AGEAFPEIEDEKLSDAVERFEAH 646
BSNT_03588___ 651 LIQQTLEKHHFNRTKTAKALGVSIRNLYYKMDKYGLANEGMQ 692
:|::|||||.:||||||||||:||||||||||||.||.:.||
BL01498___bkd 647 IIKETLEKHQYNRTKTAKALGISIRNLYYKMDKYNLAKDSMQ 688
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