Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00730 and BL01660

See DNA alignment / Visit BSNT_00730 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_00730___ydaB.1.5803.seq
#    -bsequence pep-align/BL01660___ydaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00730___ydaB-BL01660___ydaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00730___ydaB-BL01660___ydaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00730___ydaB
# 2: BL01660___ydaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     264/504 (52.4%)
# Similarity:   355/504 (70.4%)
# Gaps:           2/504 ( 0.4%)
# Score: 1451.0
# 
#
#=======================================

BSNT_00730___      1 METLQHLILHDMPNSEEIEAVKSGDHTLTYKGYRKRINQLANAMLQKGIQ     50
                     |.|||.||.|.|..|:.:||:..||.|.|:|.|.:|:||||:.:|::|:|
BL01660___yda      1 MSTLQQLINHHMETSDGLEALSGGDRTFTFKAYHQRVNQLAHYLLEEGVQ     50

BSNT_00730___     51 KGDRVALLCKNGHPASTVMFAALEIGAVVVPVSWQLKPYEMTGILKASEP    100
                     |||.:|:||||.|....::.|:|:|||.|||:||||..||:.|||....|
BL01660___yda     51 KGDHIAVLCKNNHHFPVILLASLKIGATVVPLSWQLTSYELKGILNNCRP    100

BSNT_00730___    101 KAMFYGAEFKEILDEVLPELSSLCVTMETGTAYETSAEFEALFAGPDHLP    150
                     |.|||..||.:||..:..:| ..|:.:|.|....|:.:||:||.......
BL01660___yda    101 KVMFYDLEFADILTPLREQL-QFCLMIEAGAGMNTTEQFESLFKNRPLKV    149

BSNT_00730___    151 ETEMVSPDDTALLMFTSGTTGNPKRCMITHGGIYRYVKKSNSSIARMKGL    200
                     |.|.|:..|.||::||||||||||.||:.||.:..|:.:.|....::||.
BL01660___yda    150 EAEQVTEHDLALMLFTSGTTGNPKGCMVNHGSLAAYLTEVNVKSKQLKGT    199

BSNT_00730___    201 RFLACHPIYHTSALICIMLGTFAETTFVFTKDQDPVHMLKVIEEEKIQTV    250
                     ||||.||:||.|:|..:....|......|..|.:|..:|:.||:::|..:
BL01660___yda    200 RFLASHPLYHMSSLNHVFQAAFEGIALYFLWDPEPFEILQEIEKKRIHMM    249

BSNT_00730___    251 MALPVFYTYLLEAWETHQTDLSSLVILMTGGTKVPSSLIRRYLDIGIPLA    300
                     ||.|..|||:||..:.|..||||:.:|::||||||:.||:.|.|.||.:.
BL01660___yda    250 MAFPSVYTYMLEEMKRHPFDLSSVKMLVSGGTKVPARLIKEYNDHGIMMV    299

BSNT_00730___    301 HGYGSTEAWGISTWTPDMGMDKAASAGKPVAGVKVKVEDPLTGEELPQGE    350
                     .||||||||.:|.|.||||.||..|||||:..|.:|:|||.|.||||.||
BL01660___yda    300 QGYGSTEAWTVSVWRPDMGWDKVTSAGKPIPQVSIKIEDPDTHEELPTGE    349

BSNT_00730___    351 IGEIVVHTPFLFKGYEDNPEATAKVLQNGWFRTGDSGYVDEDGFIFITGR    400
                     :||:||.:|::|:||..||.||.|||::|||..||||.:|||||::||||
BL01660___yda    350 VGEVVVKSPYVFEGYYQNPSATQKVLKDGWFYMGDSGKLDEDGFLYITGR    399

BSNT_00730___    401 YKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVK    450
                     |||||:|||||:|||||||:|.|:||::|:||:|:||.:|||.|:|::||
BL01660___yda    400 YKDVIVYGGDNIYPDQVEEIIDQVPGVVESAVIGVPDEMYGEVPRAYVVK    449

BSNT_00730___    451 NGGQRITEEDVIAFCKERLSAYKIPEVEFVNELPKNNLGKVKKDVLRNQA    500
                     |....:.:||:||:||||||.|||||:.|::.||||.|||:.|..||..|
BL01660___yda    450 NESAGLKKEDIIAYCKERLSDYKIPEIVFIDSLPKNRLGKIVKKDLRELA    499

BSNT_00730___    501 VHS-    503
                     |.. 
BL01660___yda    500 VKGQ    503


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