Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04882 and BL01678
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence pep-align/BSNT_04882.1.5803.seq
# -bsequence pep-align/BL01678___yusR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04882-BL01678___yusR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04882-BL01678___yusR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04882
# 2: BL01678___yusR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 175/246 (71.1%)
# Similarity: 207/246 (84.1%)
# Gaps: 0/246 ( 0.0%)
# Score: 899.0
#
#
#=======================================
BSNT_04882 1 MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEKI 50
|.:.||.|||||||||||:|.|:.||.|||.|.||||||::||||||..|
BL01678___yus 1 MEMKNKTALVTGGGTGIGRAVSLSLANRGAAVVVNYSRSKAEAEETVGMI 50
BSNT_04882 51 RKAGGQAFAIQADVSKNSDVQDMVQTIVKTYGPIDVLVNNASITRHIPMD 100
...||:|.|::|||||.|:||||....|..:|.:|:|||||||||||.:|
BL01678___yus 51 ESQGGRALAVKADVSKISEVQDMFDRAVGEFGTVDLLVNNASITRHIELD 100
BSNT_04882 101 DLEAATEDVWDELYAVNVKGMFFCARAVVPFMKKSKAGAIVNVGSIAGVT 150
|||.|:|:||||||||||||||.||||..||||::|.|||||||||||:|
BL01678___yus 101 DLEGASEEVWDELYAVNVKGMFNCARAAAPFMKRNKQGAIVNVGSIAGLT 150
BSNT_04882 151 GAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAGREE 200
|:|||:||||||:|||||||||||||||:||||.||||||:||||.|.||
BL01678___yus 151 GSGSSLPYAVSKAAVHGLTKSLAHALAPDIRVSCVAPGAVSTRWWEGNEE 200
BSNT_04882 201 KMKSMIGSLPLQCIAEPEEVAKLICSLVEQESLTGQIITIDSGQTL 246
|||.:...|||:.|||||::|.|||:|:|||::||||:|.|.||||
BL01678___yus 201 KMKRLSQKLPLERIAEPEDIALLICALLEQETVTGQILTADCGQTL 246
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