Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00497 and BL01689
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00497___ycdC.1.5803.seq
# -bsequence pep-align/BL01689___ycdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00497___ycdC-BL01689___ycdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00497___ycdC-BL01689___ycdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00497___ycdC
# 2: BL01689___ycdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 194/511 (38.0%)
# Similarity: 273/511 (53.4%)
# Gaps: 58/511 (11.4%)
# Score: 940.5
#
#
#=======================================
BSNT_00497___ 1 MKVTERISKNNDNNRKGPFFTLNEERSFYIINRILFVVDSLKGMTSLVNK 50
:|.:
BL01689___ycd 1 ----------------------------------------------MVRE 4
BSNT_00497___ 51 QLKKKAQEIGNVPTHYELEIEDYDQKQKKNGQAYFIWKDPKDPEKHITVE 100
|||:|||.|..||.||:|.||||.:|.:|..:.:|.|:|.::||:.|:||
BL01689___ycd 5 QLKQKAQSISKVPPHYQLMIEDYGEKYEKERRVFFAWQDIEEPERDISVE 54
BSNT_00497___ 101 LRNDGALLTFSTTVRSETDKQLPDAELKLTALQFAAVHHPGTFMNFHFQG 150
|.:.|.|::.:.......::.|||..|...||||...|:|.....|.|..
BL01689___ycd 55 LDHQGRLISLTKEYEPVVEEALPDERLLQIALQFTEQHYPNAPYEFVFHE 104
BSNT_00497___ 151 KEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQVVHFLYYGEGHKAEV 200
|:...|.:||.|.:..|.||:|.:||.:.:.::|:|:.|.|.|......:
BL01689___ycd 105 KKVTEQFVRFTYVQTVLDLPLPQTGFYVRVAKNGEVIEFRYNGGTSSFSI 154
BSNT_00497___ 201 PTEFVAKEKVVSHYLNTMSFELMYDVI------DGEQEPRLVYEPILPGY 244
|.:...|:.|.:.||..:.|||..:.| .|:..|.|:||..||.:
BL01689___ycd 155 PKQIADKQSVTADYLEHVQFELAVEKIRSELYEGGDDLPHLIYEADLPFF 204
BSNT_00497___ 245 SYPADVDEIVPDQHIA-DERIENTAPLPPLQNKE-EVDIFALLGFTSDMQ 292
|||||:.|....:..| ||..|:|.|||.|...: ..||..::|||..|:
BL01689___ycd 205 SYPADITEKRQMKPAADDEEEEDTLPLPVLPEADRHADIDDMIGFTPSMR 254
BSNT_00497___ 293 KVSERDFGEQIGSTWRRGAAPERKDLSIRSYFETRNKNTIKMKTDKRTGK 342
|:.|.|.||.||:.||.|..||.:|.||..||||.|:||:|:..||.:||
BL01689___ycd 255 KIRETDLGESIGTVWRLGDDPEPRDRSIAGYFETWNQNTLKIVKDKNSGK 304
BSNT_00497___ 343 LKAALSFMERPNNRQCSTEECQEIALQFLYALYPRAAEFFRVNPVRID-E 391
||...||::.......|.|:|.:.||||||.|||.|...||::|...| :
BL01689___ycd 305 LKGIASFIKSEGPPVLSGEDCLKRALQFLYRLYPDADRLFRMHPAENDGD 354
BSNT_00497___ 392 RGRVRNHFSVWYKGVPLRFGAARIIVNPETGLIDAFMAPDIEPEQLEAIN 441
|......|.:.|||||||.|:|.|.:|..||.:..:..|:||||.|..::
BL01689___ycd 355 RSNAFFQFDLQYKGVPLRLGSANISINRTTGRVVGYHGPEIEPETLIDLS 404
BSNT_00497___ 442 HRPDVSAEEAREAFLAAFDVKLEWQPDFTAGSDQHYKLVYKPVYPSYIDA 491
..|.:|.|||:..|.|||||||:|:.|::...|..|:|||:||||.:|||
BL01689___ycd 405 PSPSISEEEAKAVFAAAFDVKLQWERDYSREKDDFYRLVYRPVYPYFIDA 454
BSNT_00497___ 492 HIRK---KKRL 499
|..| .|.:
BL01689___ycd 455 HDGKAFMSKNI 465
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