Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00370 and BL01788
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence pep-align/BSNT_00370___ybxI.1.5803.seq
# -bsequence pep-align/BL01788___blaRI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00370___ybxI-BL01788___blaRI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00370___ybxI-BL01788___blaRI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00370___ybxI
# 2: BL01788___blaRI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 105/601 (17.5%)
# Similarity: 159/601 (26.5%)
# Gaps: 309/601 (51.4%)
# Score: 435.5
#
#
#=======================================
BSNT_00370___ 0 -------------------------------------------------- 0
BL01788___bla 1 MSSSFFIPFLVSQILLSLFFSLIILIKKLLKAQITVGTHYHLSVISLLAL 50
BSNT_00370___ 0 -------------------------------------------------- 0
BL01788___bla 51 IAPFLPFHYLKSNHFDWILNLGGASSTLSHTRSTDKTAEAIGQHANWVQD 100
BSNT_00370___ 0 -------------------------------------------------- 0
BL01788___bla 101 FSMSIEQSSFKMIDSAFFAVWILGIAVMLIATLYSNRKIGKIKKSLQMVN 150
BSNT_00370___ 0 -------------------------------------------------- 0
BL01788___bla 151 NKELLTLFRTCKEEIRFHQKVILGCSPLIKSPITFGVVRPYIILPKDISM 200
BSNT_00370___ 0 -------------------------------------------------- 0
BL01788___bla 201 FSADEMKCVLLHELYHCKRKDMLINYFLCLSKIVYWFNPLVWYLSKEAKT 250
BSNT_00370___ 1 ----------------------------------------MPFDYFLKEE 10
...::....:
BL01788___bla 251 EMEISCDFAVLKTLDKKLHLKYGEVILKFTSLKQRTSSLVAASEFSSSYK 300
BSNT_00370___ 11 QTKER-EKVVNQNEGEN--KMKKWIYVVLVLSIAGIGGFSVHAASSAHEK 57
..|.| ..|||...... |:|..:...|||.|...|..||...:...:.
BL01788___bla 301 HIKRRIVTVVNFKAASPLLKVKSALVFALVLGIILAGTPSVSILTMQRDT 350
BSNT_00370___ 58 HLNVSRMNVDDE-----FKDTDGTFILHDLQKEQTFVYNRKRANQRQTPQ 102
|. :|..||:.| |....|.|:|.|..:::..:||||.:..|..|.
BL01788___bla 351 HF-LSGANVEYEDDSTFFDGFSGGFVLFDSNRKKYTIYNRKESTARFAPA 399
BSNT_00370___ 103 STFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESA 152
||:||.:||:.|:...:........|||.:..::.||:|..|.|||..||
BL01788___bla 400 STYKVFSALLALESGIITKNNSQMTWDGTQYPYKEWNQDQDLFSAMSSSA 449
BSNT_00370___ 153 IWYYQALARDIGEERMKSWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQ 202
.||:|.|.|.|||:.::.:|.::.|||||.||..: :||..||.||||||
BL01788___bla 450 TWYFQKLDRQIGEDHLRRYLKSIHYGNEDFSGPAN-YWLDGSLQISPLEQ 498
BSNT_00370___ 203 ETFLEKLFKEELPFDKPVMKTVKRMMIQEEGDHYTLYGKTGTRLT--DMG 250
...|:|.:..|..|.:..::|||..:..||.:...|.|||||.:. ::.
BL01788___bla 499 VNMLKKFYDNEFDFKQSNIQTVKDSIRLEESNGRILSGKTGTSVINGELH 548
BSNT_00370___ 251 LGWFVGFIKTEHGSYVFVTNVDD----SGTKAKNITVDILKKYGLITS-- 294
.|||||:::|...::.|..::.. :|:.|..|.:.||.|.|:..|
BL01788___bla 549 AGWFVGYVETAENTFFFAVHIQGEKRAAGSTAAEIALSILDKKGIYPSAS 598
BSNT_00370___ 294 - 294
BL01788___bla 599 R 599
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