Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05742 and BL01790

See DNA alignment / Visit BSNT_05742 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05742___ywhA.1.5803.seq
#    -bsequence pep-align/BL01790___ywhA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05742___ywhA-BL01790___ywhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05742___ywhA-BL01790___ywhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05742___ywhA
# 2: BL01790___ywhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:      91/139 (65.5%)
# Similarity:   115/139 (82.7%)
# Gaps:           0/139 ( 0.0%)
# Score: 487.0
# 
#
#=======================================

BSNT_05742___      1 MDHDKLEANLLDHALTKYLKSTKQLDEATVPKHVNNVRGFILRIIYRHGS     50
                     |:|.::||||||||.||||:|:|:|||.|:||.:.:.:|||||||||||:
BL01790___ywh      1 MNHHRIEANLLDHAFTKYLRSSKKLDEETIPKSITSGKGFILRIIYRHGT     50

BSNT_05742___     51 CTIKDILKEVTLSPSATTTALNHLEQEGFIERSRNNNDRRTVWITLSESG    100
                     ||||:||:||.||||||||||||||:||.:.|||||:|||||||.||:.|
BL01790___ywh     51 CTIKEILQEVALSPSATTTALNHLEKEGLVIRSRNNDDRRTVWIELSQEG    100

BSNT_05742___    101 RGAAEQMIENRQQLIDGMFERLTAEEKETFLAIIAKLAQ    139
                     ...|.||:||||.|||.:|.:|:.|||:.|.|:|.|:..
BL01790___ywh    101 TRIAAQMVENRQALIDKLFGKLSEEEKKAFFAVIEKVMM    139


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.