Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06031 and BL01838
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence pep-align/BSNT_06031.1.5803.seq
# -bsequence pep-align/BL01838.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06031-BL01838.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06031-BL01838.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06031
# 2: BL01838
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 635
# Identity: 167/635 (26.3%)
# Similarity: 264/635 (41.6%)
# Gaps: 192/635 (30.2%)
# Score: 592.5
#
#
#=======================================
BSNT_06031 1 MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGD 50
||||||.|...|:..|:.:|..|..::.|:::|::.|..:.|||||.||:
BL01838 1 MKTLDVQAFQTGLDKTLTELKNQTDEISKVKQSIKGLTSLDDALKGAGGE 50
BSNT_06031 51 AIRTFYEECHKPFLLFFGMFIDEYKKVLKQTQHAISSVESDSHGMIAEAF 100
|||:||||||..||||:..||.:||.:|::|:.|:.|:|.:.:|.|:::|
BL01838 51 AIRSFYEECHTTFLLFYESFISDYKGLLEKTKSALHSLEPNQNGFISQSF 100
BSNT_06031 101 LSHDARHGVKHAREVTEQLTDAVNRQTSAIGHIVSLPAVNDTFFRMETEQ 150
|.::...||..|..:|.:||...|:..:.:.|||.||.::|:......::
BL01838 101 LENELHDGVSQAESLTGRLTSKANQTMATVSHIVDLPDLDDSAVNENAKK 150
BSNT_06031 151 AERLITDTLHKLFQFDGQQTQALE-AKSDFQTMKKYIDQLETMYTGPKIE 199
|:|.|::||.||..||.:||.||: |:.|..|||:||.|||.||||||||
BL01838 151 AQRQISETLEKLHTFDREQTNALKAAREDLDTMKQYIQQLEKMYTGPKIE 200
BSNT_06031 200 ITGYKSGSILKSQEQENINQTFGAINPQMKQPDDSPMEMMLKKIEK---H 246
|:.||||||||.|....|:|..|.:...::.|.::|||.||.::|: .
BL01838 201 ISEYKSGSILKPQNDSTISQAPGGLQNDLQNPGETPMEKMLGRLEEKAAE 250
BSNT_06031 247 KQSNVDIVMKDGKQQKIEREI---------------------HADDSNVT 275
..:|.| .:|.::..|..|| ||.::..:
BL01838 251 TLTNPD--TQDKEKTNIAHEILSYFETFGEPLDVGDKALLGYHAANATAS 298
BSNT_06031 276 V------------------------LQKEAAAH----------PKVYGDI 291
: .:.:..:| .||...|
BL01838 299 IAWTRKLKIYYQGGKPTKWQRFKGEYKFQVMSHRSWTSQGDHSSKVARTI 348
BSNT_06031 292 RVINDKLYNNKRLKKIDTIEVIDELTRNTASID----------------- 324
:.|:|...:|..|||.. :..||.|
BL01838 349 KNISDSNPSNPLLKKAQ---------KFVASYDSPSMMFKHAVGFPKNQH 389
BSNT_06031 325 -YVGGKYYVYENGQIVREFYAGGKKRLEEVSYIPEDKVGGAKSLDSF--L 371
::.||.: ..:......||....:|..: |..|..:|:.. :
BL01838 390 SFIDGKEF---RKRAALRTKAGAVDIMESTA-----KAKGFTALERGVPI 431
BSNT_06031 372 AGTQYEF----IEWVSPQGAVKKLAVRGGK---RVVTDVAKHVVEKDIKG 414
.||...| .|:..|:.:.|..|.:.|: .|.||:.. :..
BL01838 432 VGTAVTFASNLTEYTDPENSDKSFAEKTGRFAAGVGTDIFA------VST 475
BSNT_06031 415 DVKKKPSKGSVNSKWWHP----------GYVDNLSSSQTVIGIKNSPKGL 454
.|:...:.|||.. | |....::||.....||:: |.
BL01838 476 GVEIGATIGSVGG----PVGVIVGGAIGGVAGAIASSSYGDAIKDA--GE 519
BSNT_06031 455 STLGSSTR--QNALDAGKGWVGQGAEKMYDKAGNFLGYKSVDKMRAFRLQ 502
...||..: :|:.::.|.|..
BL01838 520 KVAGSIEKGIKNSFESVKSWFK---------------------------- 541
BSNT_06031 503 YKPKEKMWRANFTENEITVVGSKTELRNVHVDILD 537
BL01838 541 ----------------------------------- 541
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