Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00684 and BL01857

See DNA alignment / Visit BSNT_00684 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00684___gabR.1.5803.seq
#    -bsequence pep-align/BL01857___gabR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00684___gabR-BL01857___gabR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00684___gabR-BL01857___gabR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00684___gabR
# 2: BL01857___gabR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity:     293/482 (60.8%)
# Similarity:   364/482 (75.5%)
# Gaps:           9/482 ( 1.9%)
# Score: 1511.0
# 
#
#=======================================

BSNT_00684___      1 MDITITLDRSERADYIYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLK     50
                      .|||.:|||:.|:|||.||||::|:||.||||||..|:||||||||.|.
BL01857___gab      1 -MITIPIDRSKGAEYIYHQIYQRIKEEIFSRNLLPGKKLPSKRELAETLN     49

BSNT_00684___     51 VSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHP-PFALPDDL     99
                     ||:||||:||||||||||||:.||||||||:::.|.|..|| |..|..:|
BL01857___gab     50 VSINSVNAAYQQLLAEGYLYSRERKGFFVEQIETFHASRHPGPLQLEKEL     99

BSNT_00684___    100 KEIHIDQSDWISFSHMSSDTDHFPIKSWFRCEQKAASRSYRRLGDMSHPQ    149
                     .|....:..||||||||.||.|||.|:|.||||||.|.....||:|:|||
BL01857___gab    100 VEEPESKDGWISFSHMSVDTAHFPFKTWLRCEQKAVSSHVDELGEMTHPQ    149

BSNT_00684___    150 GIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELLPKEAVYA    199
                     |:||||..|.|.|:|||||||.|||::|.||||.|:..|.:|||..||||
BL01857___gab    150 GVYEVRQTIARFIALTRGVKCLPEQIVISAGTQSLIHTLQDLLPASAVYA    199

BSNT_00684___    200 MEEPGYRRMYQLLKNAGKQVKTIMLDEKGMSIAEITRQQPDVLVTTPSHQ    249
                     ||||||.|:|:||||.||:|.||.||.|||.|:||.|..||||..|||||
BL01857___gab    200 MEEPGYSRIYRLLKNEGKEVATIQLDHKGMRISEIHRLNPDVLFVTPSHQ    249

BSNT_00684___    250 FPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLD    299
                     ||:|.|||||||||||||.::...|||:||||||||.|..|:||||||||
BL01857___gab    250 FPTGIIMPVSRRIQLLNWVSDGANRYIVEDDYDSEFKYGSDTIPALQSLD    299

BSNT_00684___    300 RFQNVIYMGTFSKSLLPGLRISYMVLPPELLRAYKQR-GYDLQTCSSLTQ    348
                     |.:.|||:|||||||||||||||||||.:||:.|::| .:.:|:.|.|||
BL01857___gab    300 RSEKVIYIGTFSKSLLPGLRISYMVLPQKLLKRYRKRHHFSIQSSSVLTQ    349

BSNT_00684___    349 LTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAG    398
                     |.|||.|||||||||||||.|.|::||.|||.:|...|:|.|.:||.:||
BL01857___gab    350 LALQELIESGEYQKHIKKMNQIYEKKRTRLIGSLVKHFNGRVKIKGESAG    399

BSNT_00684___    399 LHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNL-KENKRQTGRPALII    447
                     ||||.:|:|.|:|:::|..|...::|::|||||.| ||..:..|..:|::
BL01857___gab    400 LHFVADFETDRSEEEVLLRAKERRVEVYGMSRFTLKKEQTKHEGTVSLVL    449

BSNT_00684___    448 GFARLKEEDVQAGVQRLFKAVYGHKKIPVTGD    479
                     |||::..:.:..|..:|::||.|.:|:     
BL01857___gab    450 GFAKIAADQIDEGTAKLYEAVCGDEKL-----    476


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