Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00983 and BL01862
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_00983___ydhC.1.5803.seq
# -bsequence pep-align/BL01862___ydhC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00983___ydhC-BL01862___ydhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00983___ydhC-BL01862___ydhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00983___ydhC
# 2: BL01862___ydhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 78/227 (34.4%)
# Similarity: 121/227 (53.3%)
# Gaps: 4/227 ( 1.8%)
# Score: 343.0
#
#
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BSNT_00983___ 1 MDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSP 50
..|.:.:...|:.|.::.||.||..|.::|||||.|:::||...|||||
BL01862___ydh 1 -MKFSIQRAVSYHDQVHHYLKDMIIKGGYQPGERIYESKIAKELQVSRSP 49
BSNT_00983___ 51 IREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELV 100
:|||:|.||::|||..||::..::...|.||::|||:.|..||.|||.|.
BL01862___ydh 50 VREAIRTLEQEGLLLIDDKSKITVYEPTIKDLEEIYQCRQALESLAVSLA 99
BSNT_00983___ 101 IDEADEEELTILEKQLEETEKAIRN-GTEDTE-IIRLNQKFHELLVDFSH 148
...|..|.|.::.:.|.|..|..:: |.|... ::|||.:||:.:::.|.
BL01862___ydh 100 TRLASNETLELISETLSEAHKHQKSQGPESANALLRLNTQFHDAIIEASE 149
BSNT_00983___ 149 NRHLKNLLEHVNDLIHFCRILNYTGDHRAETILREHRRIFEEVKKKNKEA 198
|..|:..|..:..|..|.|..|.....|...|:.:|..|...::.:|...
BL01862___ydh 150 NERLQKQLLDLRSLTFFYRSKNLEKPERTLEIINQHEEILRHMQDRNDAK 199
BSNT_00983___ 199 AKQHVLAHFNHDCEHLKHVLEEGKEN- 224
|.:.:..|...|..:||.||......
BL01862___ydh 200 AAESMRKHIEADLCYLKEVLFRSSAAR 226
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