Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00904 and BL01877
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_00904.1.5803.seq
# -bsequence pep-align/BL01877.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00904-BL01877.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00904-BL01877.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00904
# 2: BL01877
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 62/213 (29.1%)
# Similarity: 103/213 (48.4%)
# Gaps: 44/213 (20.7%)
# Score: 248.5
#
#
#=======================================
BSNT_00904 1 --MSKVDRRITKSQEAIKIALIELMTEKSFDHITIKEISERANVNRGTIY 48
..|.|||:.::::.|:.||.|||..|:|:.|::.:|:::|::||||.|
BL01877 1 MTEQKKDRRVKRTKKMIRDALSELMKNKAFEEISVTDITKKADINRGTFY 50
BSNT_00904 49 LHYLDKFDLLEKIMEEHINNMGDFCE-SAAEMDWIES---------TVHC 88
|||.||:|||::..||.|..:....: |...||.:.. .|..
BL01877 51 LHYEDKYDLLDQSEEEIIQEINKIAKRSIHSMDVLNQDVIDHPLTFVVDI 100
BSNT_00904 89 MEYLESNYLFFSTMLASEGARYFRSQF---LKFNIEE----FRKDVDVTK 131
.:|::.|.:|...:|..:|...||.:| |..|::. .|.|..|
BL01877 101 FQYIKENEVFMKAVLGPKGPGSFRLKFKSVLISNLKRLKTAIRTDPIV-- 148
BSNT_00904 132 GKNYGQSEDVIVEFIANAYVGVVEWWLKNEMPYPPRVMAEKVGELLERIL 181
.||.::.:|..|::.|::.||:|.|...|..|| .:|.:|.
BL01877 149 ------PEDYLISYITGAHISVMQQWLENGMKETPHDMA----LILSKIT 188
BSNT_00904 181 ------------- 181
BL01877 189 GMGPAYAAGLRKK 201
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