Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05973 and BL01938
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence pep-align/BSNT_05973___yxjA.1.5803.seq
# -bsequence pep-align/BL01938___nupG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05973___yxjA-BL01938___nupG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05973___yxjA-BL01938___nupG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05973___yxjA
# 2: BL01938___nupG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 321/397 (80.9%)
# Similarity: 363/397 (91.4%)
# Gaps: 0/397 ( 0.0%)
# Score: 1707.0
#
#
#=======================================
BSNT_05973___ 1 MYFLLNLVGLIVIMAVVFLCSPQKKKIKWRPIMTLIVLELLITWFMLGTK 50
||||:|::|:.::|:|::.|||:||.:|||||::|.::|||:||||||||
BL01938___nup 1 MYFLINILGIFIVMSVIYFCSPRKKSVKWRPILSLFIVELLVTWFMLGTK 50
BSNT_05973___ 51 VGSWAIGKIGDFFTWLIACASDGIAFAFPSVMANETVDFFFSALLPIIFI 100
:|.|||..|..||:||||||||||||||||||.||||||||||||||||:
BL01938___nup 51 IGGWAINLIASFFSWLIACASDGIAFAFPSVMGNETVDFFFSALLPIIFV 100
BSNT_05973___ 101 VTFFDILTYFGILPWLIDKIGWVISKASRLPKLESFFSIQMMFLGNTEAL 150
|||||||.|||||.|:||||||||||.|||||||||||||||||||||||
BL01938___nup 101 VTFFDILAYFGILTWMIDKIGWVISKVSRLPKLESFFSIQMMFLGNTEAL 150
BSNT_05973___ 151 AVIRQQLTVLSNNRLLTFGLMSMSSISGSIIGSYLSMVPATYLFTAIPLN 200
||||.||.||.:|||||||:||||||||||:||||:||||||:|||||||
BL01938___nup 151 AVIRGQLAVLKDNRLLTFGIMSMSSISGSILGSYLTMVPATYVFTAIPLN 200
BSNT_05973___ 201 CLNALIIANLLNPVHVPEDEDIIYTPPKEEKKDFFSTISNSMLVGMNMVI 250
||||||:|::||||.|.:||||||.|||||||||||||||||:|||||||
BL01938___nup 201 CLNALILASILNPVEVTKDEDIIYVPPKEEKKDFFSTISNSMMVGMNMVI 250
BSNT_05973___ 251 VILAMVIGYVALTSAVNGILGVFVHGLTIQTIFAYLFSPFAFLLGLPVHD 300
||||||||||||||.:|||||:.|.|||||.||:|:||||||||||...|
BL01938___nup 251 VILAMVIGYVALTSCLNGILGLIVDGLTIQKIFSYIFSPFAFLLGLAPGD 300
BSNT_05973___ 301 AMYVAQLMGMKLATNEFVAMLDLKNNLKSLPPHTVAVATTFLTSFANFST 350
||||||||||||||||||||:|||..|.::.|||.|||||||||||||||
BL01938___nup 301 AMYVAQLMGMKLATNEFVAMMDLKTQLDAISPHTAAVATTFLTSFANFST 350
BSNT_05973___ 351 VGMIYGTYNSILDGEKSTVIGRNVWKLIVSGIAVSLLSAAIVGLFVW 397
:|||||||||:.:||||.:||||||||:|||||||||||.|||||||
BL01938___nup 351 IGMIYGTYNSLFNGEKSAIIGRNVWKLLVSGIAVSLLSAGIVGLFVW 397
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