Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03042 and BL01957
See
DNA alignment /
Visit
BSNT_03042 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence pep-align/BSNT_03042___yoeB.1.5803.seq
# -bsequence pep-align/BL01957___yoeB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03042___yoeB-BL01957___yoeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03042___yoeB-BL01957___yoeB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03042___yoeB
# 2: BL01957___yoeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 112/182 (61.5%)
# Similarity: 136/182 (74.7%)
# Gaps: 1/182 ( 0.5%)
# Score: 606.0
#
#
#=======================================
BSNT_03042___ 1 MKKCLLFLTTIALILSLSTNAFAKN-TSGDLSQKQALQLALSAREHFWNT 49
|||.::.|..:.|||....:..||| |||:|:.||.:||.|.||||||||
BL01957___yoe 1 MKKLIVCLLAVLLILPAGASLAAKNQTSGNLTNKQVMQLTLQAREHFWNT 50
BSNT_03042___ 50 MSGHNPKVKKAVCPSGTFEYQNLQYVYMCSDLGTKAKAVNYLTPIFTKTA 99
|||||||.|.:.|||.||||:.|.|.||||:..||||..:||||:|||.|
BL01957___yoe 51 MSGHNPKAKNSTCPSKTFEYRGLPYTYMCSEFSTKAKLTDYLTPVFTKDA 100
BSNT_03042___ 100 IEKGFKDYHFTVSKGKLAVPIGDGDNLLNWKKSTAKLVSKKGGTITYEFT 149
|:||.:.|:....|||:|||:|||||||.|.|:..||:|:|..|.||||:
BL01957___yoe 101 IKKGLEKYNIISYKGKMAVPVGDGDNLLGWDKAKIKLISQKNNTRTYEFS 150
BSNT_03042___ 150 VPTLDGSPSAKRKVTFVKENKKWKVNQFDAVI 181
||.||||.:||||:||||||.|||:||.||.|
BL01957___yoe 151 VPALDGSVTAKRKITFVKENNKWKINQLDAAI 182
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.