Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03975 and BL02031

See DNA alignment / Visit BSNT_03975 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03975___yrrK.1.5803.seq
#    -bsequence pep-align/BL02031___yrrK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03975___yrrK-BL02031___yrrK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03975___yrrK-BL02031___yrrK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03975___yrrK
# 2: BL02031___yrrK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     123/139 (88.5%)
# Similarity:   132/139 (95.0%)
# Gaps:           1/139 ( 0.7%)
# Score: 623.0
# 
#
#=======================================

BSNT_03975___      1 MRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIK     50
                     |||||||||:|||||||||||||||||||||||:||.|||||:||:||.|
BL02031___yrr      1 MRILGLDLGSKTLGVALSDEMGWTAQGIETIKIDEAGGDYGLNRLAELTK     50

BSNT_03975___     51 DYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT    100
                     ||.||||||||||||||||||||||||.||:|||.|:.||||||||||:|
BL02031___yrr     51 DYVIDKIVLGFPKNMNGTVGPRGEASQKFAEVLEETFQVPVVLWDERLST    100

BSNT_03975___    101 MAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLN-    138
                     ||||:|||:||||||||||||||||||||||||||||| 
BL02031___yrr    101 MAAERMLISADVSRQKRKKVIDKMAAVMILQGYLDSLNS    139


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.