Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00786 and BL02197

See DNA alignment / Visit BSNT_00786 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_00786___ydbR.1.5803.seq
#    -bsequence pep-align/BL02197___ydbR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00786___ydbR-BL02197___ydbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00786___ydbR-BL02197___ydbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00786___ydbR
# 2: BL02197___ydbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     448/498 (90.0%)
# Similarity:   464/498 (93.2%)
# Gaps:          15/498 ( 3.0%)
# Score: 2227.5
# 
#
#=======================================

BSNT_00786___      1 MTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTG     50
                     ||||||||.|||||.|||.|||||||||||||||||||:|||||||||||
BL02197___ydb      1 MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTG     50

BSNT_00786___     51 TGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02197___ydb     51 TGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA    100

BSNT_00786___    101 KVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVV    150
                     :|||||||||||||||||||||:|||||||||||||||||:||..|||||
BL02197___ydb    101 RVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVV    150

BSNT_00786___    151 MDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTE    200
                     :||||||||||||:||||||||||:||||||||||||||||||||||||.
BL02197___ydb    151 LDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTN    200

BSNT_00786___    201 PEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRT    250
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BL02197___ydb    201 PEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVFGRT    250

BSNT_00786___    251 KRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV    300
                     |||||||.||||||||.|||||||||||||||||||||:|||||||||||
BL02197___ydb    251 KRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV    300

BSNT_00786___    301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02197___ydb    301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK    350

BSNT_00786___    351 SMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYM    400
                     .|||||||||||||||||.||||||:||||||||:|:||.|.||||||||
BL02197___ydb    351 DMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYM    400

BSNT_00786___    401 TAAAELLEDHDAVTVVAAAIKMATKEPDDTPVRLTDEAPMVSKRYKN--Q    448
                     |||||||||||:||||||||||.|||||:||||||:|||:.:||.||  .
BL02197___ydb    401 TAAAELLEDHDSVTVVAAAIKMMTKEPDNTPVRLTEEAPLRTKRNKNHHH    450

BSNT_00786___    449 RSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSNDRRSSGDRRQKKSY--    494
                     |||||||  ||||||    .|||||||||     |||.||||||||  
BL02197___ydb    451 RSSKRRD--GGGYRG----KNNRSSYDKK-----RSSNDRRQKKSYNS    487


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