Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00975 and BL02211

See DNA alignment / Visit BSNT_00975 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00975___ydgH.1.5803.seq
#    -bsequence pep-align/BL02211___ydgH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00975___ydgH-BL02211___ydgH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00975___ydgH-BL02211___ydgH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00975___ydgH
# 2: BL02211___ydgH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1048
# Identity:     387/1048 (36.9%)
# Similarity:   585/1048 (55.8%)
# Gaps:         172/1048 (16.4%)
# Score: 1789.5
# 
#
#=======================================

BSNT_00975___      1 MRAIIKFKWAIAAIVLALTVVLSLFSPNLTELANQKGQAQLPADAVSERA     50
                     ||.|||.:|.|||:.:|:..||.:.:|::.:|..:|||..:|....|..|
BL02211___ydg      1 MRTIIKARWIIAALWIAMAAVLFITAPDMGQLTKEKGQIAVPEGYPSSYA     50

BSNT_00975___     51 NAILKQA---GEDNNSISVVFTLDNAIKKETENQLRIMIDKIKKIDG--V     95
                     |.:|:|.   |:.|.|:.|||. |..:....|..|:..|..::|...  |
BL02211___ydg     51 NKLLEQMSKDGDTNKSVVVVFQ-DKHLLPNREAALKKAITTLEKDSSLHV     99

BSNT_00975___     96 EEVTSPLSAEKEVKDQLMSKDKKTVLMPVT-----ITGSDKKAEKIADEI    140
                     .::||..:|:::::.||:|||:.|:|:|||     |:.::.|| |:.:::
BL02211___ydg    100 SDITSYFNADEDIQKQLLSKDRTTLLVPVTFDANKISAAEFKA-KVNEKL    148

BSNT_00975___    141 YQIVPDDLTAYITGASLINQDFAHSSEEGLKKTEVITVCLIIGLLLIVFR    190
                     ..:   .|...:||..||:.|...||:|||||||.|||..|:.:|::|||
BL02211___ydg    149 KTL---KLDYEMTGQPLIDDDVMTSSQEGLKKTEYITVGFILIVLILVFR    195

BSNT_00975___    191 SVVTPFIPIVVVGFSYLISQSILGILVYNVDFPISTFTQTFLVAILFGIG    240
                     |.|.||:|::.|..|||:|||::..||...|||:|||||.|:|||:||||
BL02211___ydg    196 SAVAPFVPLLAVALSYLVSQSVVAYLVKYADFPLSTFTQIFMVAIMFGIG    245

BSNT_00975___    241 TDYCILLLTRFREELANGHDKKEAALIAYRTGGKTLFISGFAVLIGFSAL    290
                     ||||||||:||:||:|.|.||.||.|..|:|.|:|:..||.||||||:.:
BL02211___ydg    246 TDYCILLLSRFKEEIARGKDKIEAILTTYKTAGRTVLFSGIAVLIGFTCI    295

BSNT_00975___    291 GFAKFAIFQSAVGVAVGVGILMIILYTLLPLFMVTLGEKLFWPSKKVLSH    340
                     |||:|.:::|||.|||||.:|::.|.:::|.||..||:.||||.:..:.|
BL02211___ydg    296 GFAEFQLYKSAVAVAVGVAVLILALLSIVPFFMAVLGKVLFWPVRGNIGH    345

BSNT_00975___    341 SDNKLWAFLGRHSVARPFLFIVITVVITLPFILTYDDQISFDSTAEISND    390
                     ..:|||...||.:.::|.:.::|...:.:|.||.|...:|::|..||.:.
BL02211___ydg    346 PQSKLWETAGRFAFSKPLISLLIVAAVAVPPILMYKGTLSYNSLDEIGDQ    395

BSNT_00975___    391 YKSIKALEAIKDGFGEGKAFPINVVVKGDKDLTTADTIPYLGNISKAIEK    440
                     |:|:.|...|.|.||.|::.|:.||:|....|.|.|.:..:..||:|||:
BL02211___ydg    396 YESVSAFNTISDKFGPGESLPVTVVLKTSDALDTNDGLIAIEKISRAIEQ    445

BSNT_00975___    441 VDHVDSVMTITQPTGEKIKDLYIDNQLG----------------------    468
                     .:.|..|.:.|:|.|:.:.|||:..|..                      
BL02211___ydg    446 TNGVSKVRSATRPVGKGLSDLYVKTQANELNKGLESGNKGLKKIKDGLAE    495

BSNT_00975___    469 ---SVSD----------GLNKTVKGIADVQSGLTDIENGLNQMAGQTGSA    505
                        |::|          |:|:.:||...:|:|::|:|..:.::...|..:
BL02211___ydg    496 ASKSIADQKPQIEASGKGINQLIKGTESIQAGISDVEANMRKLKEGTDQS    545

BSNT_00975___    506 SNG--------------------------------------------GSG    511
                     ..|                                            .:.
BL02211___ydg    546 KQGVAQAKKEIQTAKKQLTAQVDQLNGQIETYKEISKILKAALSQAENAQ    595

BSNT_00975___    512 GSLGDAADGLGKINQ--------------------------QLQLVSKQI    535
                     |...|....:.:.||                          :|....||.
BL02211___ydg    596 GITADVQKMIEQTNQNFKNLESEIPEVKENPSYLAIKGSYTELASAIKQG    645

BSNT_00975___    536 SQ-----TGNTAQTVQQLTA----------------------ISGQLGQI    558
                     ||     |...|...:||.|                      |:| ||||
BL02211___ydg    646 SQKAAVYTKQAANAKKQLEAADAFIAKAQEEQKVYTSKIDALING-LGQI    694

BSNT_00975___    559 QTGLEQANQ---QLSGQ----QAQAGTLTESLKKLSE-------------    588
                     :.|||:.::   ||:..    ::.||.:.|..|::.|             
BL02211___ydg    695 EKGLEETSKGQGQLADSLPKLESGAGEVAEGQKQMKEKVGEFAGQLDQLT    744

BSNT_00975___    589 -GVRSANQGLTKVSDGITASSDMLEDMSKSPTVRDTGIFIPGQVMKDKDF    637
                      |:.|:..||.|:|.|:..:.|.|:.:..:.....:|.|:|.:|:|:|.|
BL02211___ydg    745 KGLNSSVDGLEKISSGLMGAGDYLDQLKNASDQEMSGWFVPKEVLKNKQF    794

BSNT_00975___    638 KKSIDQYSFADGKGVQLSVVLDSNPYSEQAIATINQIKKAVANEVDGTPL    687
                     ::..:.|...|.....:.|:|:.|||...|||.:..|:.:|...:..|.|
BL02211___ydg    795 QQVFNSYMSDDRHITTIDVILEDNPYGNGAIAKVKDIEASVKRALPDTHL    844

BSNT_00975___    688 EDAQIVYGGVTSMNADLKELSTTDFSRTMVIMIIGLFIVLTILFRSMIMP    737
                     .||....|||:|:|||||:||..|||.|::.|:||:|::|.:||||::||
BL02211___ydg    845 HDASFGVGGVSSINADLKQLSDQDFSNTVIYMMIGIFLILVLLFRSIVMP    894

BSNT_00975___    738 IYMIASLLLTYYTSISITELIFVNGLGNAGVSWAVPFFSFVILIALGVDY    787
                     :|::.||:|||:.||.:||.||....|..|::||||||.||||:||||||
BL02211___ydg    895 VYLVGSLVLTYFASIGVTEFIFTAFFGYPGLNWAVPFFGFVILMALGVDY    944

BSNT_00975___    788 SIFLLDRFKEEVHLGIEQGVVRSMSKMGSVIITAAIILAGTFAAMMPSGV    837
                     ||||::||.|.....|...:..||..||||||:||:|||||||||:||||
BL02211___ydg    945 SIFLMERFNEYRGTDIMTAMTESMKNMGSVIISAAVILAGTFAAMLPSGV    994

BSNT_00975___    838 NTLMQVASVIIIGLLLYGLVILPLFIPAIIATFGEGNWWPFGRKKGKE    885
                     .:|:|:|::::.|||||..|:||||:|.::..||..||:||.||:   
BL02211___ydg    995 LSLLQIATLVLTGLLLYAFVMLPLFVPVMVRIFGSANWFPFKRKE---   1039


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00975 and BL02211

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
