Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03407 and BL02220

See DNA alignment / Visit BSNT_03407 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03407___ypfB.1.5803.seq
#    -bsequence pep-align/BL02220.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03407___ypfB-BL02220.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03407___ypfB-BL02220.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03407___ypfB
# 2: BL02220
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      35/58 (60.3%)
# Similarity:    44/58 (75.9%)
# Gaps:           0/58 ( 0.0%)
# Score: 183.0
# 
#
#=======================================

BSNT_03407___      1 MKTFERLLIKLLFIQAIILLGVQFLFHYQHIEPYVSKVIQYEGVDNMEGD     50
                     |||.||||.|:|.:|.:||:.||.|||:...|||:|||:|||||:||:..
BL02220            1 MKTIERLLFKILVVQTVILISVQLLFHFSKAEPYLSKVVQYEGVNNMKIG     50

BSNT_03407___     51 NKIETFKH     58
                     ..|||||.
BL02220           51 EWIETFKP     58


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.