Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00589 and BL02349

See DNA alignment / Visit BSNT_00589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00589___yciA.1.5803.seq
#    -bsequence pep-align/BL02349___yciA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00589___yciA-BL02349___yciA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00589___yciA-BL02349___yciA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00589___yciA
# 2: BL02349___yciA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:     135/349 (38.7%)
# Similarity:   174/349 (49.9%)
# Gaps:          96/349 (27.5%)
# Score: 625.5
# 
#
#=======================================

BSNT_00589___      1 MNQHTLLPKKTERLQYFGSVSPIKGEKPVEKEKMKDLQNIRKDYFFDIQH     50
                     |.:...||.|.||.:.||||..:||.||.:||:|||:||...||||||.|
BL02349___yci      1 MERKLHLPAKPERHRRFGSVEAVKGIKPTDKEQMKDIQNTPNDYFFDIDH     50

BSNT_00589___     51 VGVANVSHPVTITSAMMPAEQTTAANFTMTCNLPRNQKGINMSRLTELLQ    100
                     |||:|||||:.|.|::.|..|||...|:.|.:|.|::||||||||||.||
BL02349___yci     51 VGVSNVSHPILIASSLKPFTQTTIGAFSFTTSLARDRKGINMSRLTEQLQ    100

BSNT_00589___    101 VYHQNGWILSFSSLQQFTKELAENMDTSPASVEVRFPWFFERKSPKLEKA    150
                     .||:..|.:.|.:|:.|.|:||.||:...|||.|.|||:|||.||:.:.:
BL02349___yci    101 RYHEANWTVDFHTLKDFAKDLAGNMEQESASVSVSFPWYFERISPETKLS    150

BSNT_00589___    151 GLMHADIFMSVTYRKDQPFKQRAGISAKVTTLCPCSKEISEYSAHNQRGT    200
                     |||||||.|:|:|.:::.|.|.|||:|..||||||||||||||||||||.
BL02349___yci    151 GLMHADIHMTVSYHENKGFSQTAGITAHATTLCPCSKEISEYSAHNQRGI    200

BSNT_00589___    201 VSIWADIHP--------AASLLICLSLNGC--------RP----------    224
                     :.|.|.|:.        .|.||.....|..        ||          
BL02349___yci    201 IKITAHINEQAEMPDDFKAELLAAAETNASAKLHPVLKRPDEKRVTEQAY    250

BSNT_00589___    225 ---------LRLNAA------------MKNRSISTMPMRSCVFRRKWIKY    253
                              |||.||            ::.|:..::.:...|.|..:.|.
BL02349___yci    251 ENPRFVEDVLRLTAADLYEMDWISAFEIECRNEESIHLHDAVARLSFSKC    300

BSNT_00589___    254 ETLIIHYCSSYASLPAVNLLRTCRRTRKYQYKENGRKHNGRSKNSKNKH    302
                                                                      
BL02349___yci    300 -------------------------------------------------    300


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