Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05553 and BL02495

See DNA alignment / Visit BSNT_05553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence pep-align/BSNT_05553.1.5803.seq
#    -bsequence pep-align/BL02495___mscL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05553-BL02495___mscL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05553-BL02495___mscL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05553
# 2: BL02495___mscL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      94/155 (60.6%)
# Similarity:   111/155 (71.6%)
# Gaps:          29/155 (18.7%)
# Score: 462.0
# 
#
#=======================================

BSNT_05553         1 MKKGKWPAAHLSFFLYKYRKAGDCMWNEFKAFAMRGNIVDLAIGVVIGGA     50
                                             ||.|||:||:|||::||||||:||||
BL02495___msc      1 ------------------------MWKEFKSFAIRGNVIDLAIGVIIGGA     26

BSNT_05553        51 FGKIVTSLVNDIIMPLVGLLLGGLDFSGLSFTFGDAVVKYGSFIQTIVNF    100
                     |||||||||||::|||:||||||||||.|||||.||.:|||.|||:||||
BL02495___msc     27 FGKIVTSLVNDLMMPLLGLLLGGLDFSALSFTFVDAEIKYGLFIQSIVNF     76

BSNT_05553       101 LIISFSIFIVIRTLNGLRRKKEAAEEEAAEEAMDAQEELLKEIRDLLKQQ    150
                     .|||||||:.||.::.| :||:|.||:||.   |.|||||||||||||:|
BL02495___msc     77 FIISFSIFLFIRYISKL-KKKDAEEEKAAP---DPQEELLKEIRDLLKEQ    122

BSNT_05553       151 AKSSE    155
                     ...| 
BL02495___msc    123 TNRS-    126


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