Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04639 and BL02536
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence pep-align/BSNT_04639___pbpD.1.5803.seq
# -bsequence pep-align/BL02536___pbpD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04639___pbpD-BL02536___pbpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04639___pbpD-BL02536___pbpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04639___pbpD
# 2: BL02536___pbpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 625
# Identity: 450/625 (72.0%)
# Similarity: 534/625 (85.4%)
# Gaps: 3/625 ( 0.5%)
# Score: 2442.0
#
#
#=======================================
BSNT_04639___ 1 --MLRKIIGWILLLCIIPLFAFTVIASGKEVKQMKSLDQVLDKNINLKDI 48
.||...|||.||.:||:|.||::|||:|.:.||.||||||:.||:|||
BL02536___pbp 1 MTKLRSFFGWIFLLMLIPIFVFTLMASGREAQNMKPLDQVLDEKINIKDI 50
BSNT_04639___ 49 SLVQNSYMYDRDGSLVSEIVSDHENRVLVPFNNIPEEVKQIFLTSEDRHF 98
.||||||||||||:|:|||||||:|||.||:.:|||.|||:|||||||||
BL02536___pbp 51 GLVQNSYMYDRDGALISEIVSDHQNRVFVPYKDIPEHVKQLFLTSEDRHF 100
BSNT_04639___ 99 YEHKGFDFMGMVRATASNVKDKKIDQGASTITQQLSRNLYLSHERSFSRK 148
::||||||:||.||.|:|||...||||||||||||||||||:|||:|.||
BL02536___pbp 101 FQHKGFDFIGMARAAAANVKKGGIDQGASTITQQLSRNLYLNHERTFDRK 150
BSNT_04639___ 149 LTELAYSYQLEKKYTKNEILEAYLNTIYFNNGVYGVGSAAQFYFSKPLKS 198
.|||.||||||||.:|.||.|.||||||||:||||:|||:.|||||||||
BL02536___pbp 151 FTELLYSYQLEKKLSKEEIFEKYLNTIYFNHGVYGIGSASSFYFSKPLKS 200
BSNT_04639___ 199 LTVGEMAFICAIPNNPTLYDPLKHFDYTKSRQERLLKGLKDAGVITDKEL 248
|::.|.|||||||||||||||||||||||:||:|||:|||.|||||:||.
BL02536___pbp 201 LSLAETAFICAIPNNPTLYDPLKHFDYTKTRQKRLLEGLKKAGVITEKEY 250
BSNT_04639___ 249 KKAVKQKIKLDVEKREDKYPDYVSYVNDEFTQLVSESEGFDKRLQKASGK 298
.|||||||.|:|::::|.||||.:|||:|||:|||.:||||:||:||..|
BL02536___pbp 251 SKAVKQKITLNVKEKKDDYPDYTTYVNEEFTKLVSATEGFDERLKKAKTK 300
BSNT_04639___ 299 -QKEKIENELSARVSTLMKDGVKIYTALDPYMQNQVVAQMNSKLPYADVQ 347
:|:|||.|||.|:|:|...|:|||||||..|||:||.|:.::|||..||
BL02536___pbp 301 EEKKKIEKELSNRISSLTTSGIKIYTALDTSMQNRVVQQVKNRLPYEGVQ 350
BSNT_04639___ 348 GGAAVINHQTHQIIALSGGKNYQKYDFNRAYQAYRQPGSSIKPLLDYGPY 397
|||.|||||||||:|:||||||:|||:|.|:|||||||||||||||||||
BL02536___pbp 351 GGAVVINHQTHQIVAMSGGKNYKKYDYNLAFQAYRQPGSSIKPLLDYGPY 400
BSNT_04639___ 398 IEQTGATASSTIDASKFCSKDYCPQNYNNRTYGTVTLDTAFKNSYNTPAI 447
||:|||||.|.|||||||||:|||.|:|.||||||::.||||.||||||:
BL02536___pbp 401 IEETGATAGSMIDASKFCSKEYCPNNFNERTYGTVSIKTAFKYSYNTPAV 450
BSNT_04639___ 448 RMLDRVGIQKAFSYIEPYHFAKLVDSDYLLPAALGGFTNGMTPLEMTKAY 497
|||:|||:||.|||::|:.|.|:|.:||.|||||||||.|.:||||..||
BL02536___pbp 451 RMLNRVGVQKGFSYLKPFGFDKIVQNDYRLPAALGGFTWGFSPLEMADAY 500
BSNT_04639___ 498 TTFGNSGSYTPSHAITKVTDLKGKTLYKWNDKATQIFSVRTNMQLKKLMS 547
|||||:||||.||||||||||||||||||.||..|:||:|||.|:::|::
BL02536___pbp 501 TTFGNNGSYTSSHAITKVTDLKGKTLYKWKDKPQQVFSMRTNSQMRELLA 550
BSNT_04639___ 548 SVVKSGTGKKAYFNAPYIGGKTGTSNDYHDMWFVGLTDTYTMGVWVGKDT 597
:|||.||||||.|:..|:||||||||.|.|:|||||||||||.|||||:.
BL02536___pbp 551 AVVKEGTGKKANFSGGYVGGKTGTSNGYRDLWFVGLTDTYTMSVWVGKEA 600
BSNT_04639___ 598 PTSVEYLHSISPQLSIWKGTLQAAY 622
..:|||||...|||.||:||||.|.
BL02536___pbp 601 KGTVEYLHHAGPQLLIWRGTLQYAS 625
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