Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00407 and BL02540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence pep-align/BSNT_00407___pssA.1.5803.seq
# -bsequence pep-align/BL02540___pssA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00407___pssA-BL02540___pssA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00407___pssA-BL02540___pssA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00407___pssA
# 2: BL02540___pssA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 74/189 (39.2%)
# Similarity: 104/189 (55.0%)
# Gaps: 29/189 (15.3%)
# Score: 333.5
#
#
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BSNT_00407___ 1 --------MITIGNFICG----LLAIHSLLYHNIHSAVLFIFTGMFLDFF 38
:||:|||:.| |||....|: .|::|:..|..||..
BL02540___pss 1 MNKSVIPSLITVGNFVSGISSILLAFRGYLF----LAIIFVLIGAILDSL 46
BSNT_00407___ 39 DGMAARKLNAVSDMGRELDSFADLVTFGVAPSMLAYSVALYTLPFIGILC 88
||||||:|||||..|:||||.:|::||||||:::.||:..|..|.:|:..
BL02540___pss 47 DGMAARRLNAVSPFGKELDSLSDIITFGVAPAIITYSIVFYDAPILGLPS 96
BSNT_00407___ 89 ALTYSICGMLRLSKFNIEQSKLPTFIGMPIPFAGMCLVILS-----FTYN 133
.|.:.:||.|||::|||:......|.|:||..||..||.|: ....
BL02540___pss 97 TLLFPVCGALRLARFNIQSENQDYFTGLPITAAGTILVCLNLFSEILGKK 146
BSNT_00407___ 134 PILLAIGTCGLSYLMVSKIKFPHFK-KHAAENLESGRWN 171
|.:|.: ..||:|||||||....| |...:.:.
BL02540___pss 147 PFILIM--LFLSFLMVSKIKVISLKGKKLLKKVS----- 178
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